RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 HSPA12BQ96MM6 686 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 ZNF599Q96NL3 588 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 HEMGNQ9BXL5 484 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
TREX1-201ENST00000433541 SARDHQ9UL12 918 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 PPM1HQ9ULR3 514 aa15.76■□□□□ 0.11
TREX1-201ENST00000433541 GON4LQ3T8J9 2241 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 LRRC72A6NJI9 287 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 PROB1E7EW31 1015 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 ZSCAN12O43309 604 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 MAFKO60675 156 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SEMA4FO95754 770 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 UGT2B4P06133 528 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 CTSLP07711 333 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 XPAP23025 273 aaPredicted RBP15.75■□□□□ 0.11
TREX1-201ENST00000433541 ACSL1P33121 698 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 MMP13P45452 471 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 METAP1P53582 386 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 COPS2P61201 443 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 GALNT2Q10471 571 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 PDK1Q15118 436 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 CYTH1Q15438 398 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 MYLK3Q32MK0 819 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SYCP2LQ5T4T6 812 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 MARC1Q5VT66 337 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SLC9A4Q6AI14 798 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 FBXL19Q6PCT2 694 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 BZW1Q7L1Q6 419 aaKnown RBP15.75■□□□□ 0.11
TREX1-201ENST00000433541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.75■□□□□ 0.11
TREX1-201ENST00000433541 AADATQ8N5Z0 425 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 PLD5Q8N7P1 536 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 TSEN2Q8NCE0 465 aaKnown RBP15.75■□□□□ 0.11
TREX1-201ENST00000433541 LRRN4Q8WUT4 740 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 P3H4Q92791 437 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 NEUROG2Q9H2A3 272 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SGK2Q9HBY8 427 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 DTLQ9NZJ0 730 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SEPT10Q9P0V9 454 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 LHX3Q9UBR4 397 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 SERGEFQ9UGK8 458 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 FZD4Q9ULV1 537 aa15.75■□□□□ 0.11
TREX1-201ENST00000433541 TNRC6BQ9UPQ9 1833 aaKnown RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 hCG_1818297A0A087WSY0 165 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3DA0A087WVF3 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3IA0A087WXS9 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3EA0A087X179 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3KA0A087X1G2 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3FA6NER0 549 aaPredicted RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3LB9A6J9 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ZNF821O75541 412 aaPredicted RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 FSBPO95073 299 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3HP0C7X1 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 SCNN1BP51168 640 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 SLC10A7Q0GE19 358 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 CNTN1Q12860 1018 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ZNF211Q13398 564 aaPredicted RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 SEL1L2Q5TEA6 688 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3GQ6DHY5 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3CQ6IPX1 549 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 PLPP6Q8IY26 295 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 TBC1D3Q8IZP1 549 aaPredicted RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 SUMF1Q8NBK3 374 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 RUBCNQ92622 972 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 PIGKQ92643 395 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 FOXJ1Q92949 421 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ZC3H10Q96K80 434 aaKnown RBP15.74■□□□□ 0.11
TREX1-201ENST00000433541 OSBPL1AQ9BXW6 950 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 MIR1-1HGQ9H1L0 117 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 NT5MQ9NPB1 228 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 WASF2Q9Y6W5 498 aa15.74■□□□□ 0.11
TREX1-201ENST00000433541 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 NEMP1O14524 444 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 PIGNO95427 931 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 IGLV3-19P01714 112 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 TGM2P21980 687 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 CCNCP24863 283 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 DRD3P35462 400 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 HSPA9P38646 679 aaKnown RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 PTGER3P43115 390 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 NEK3P51956 506 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 SLC10A2Q12908 348 aaPredicted RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 GRM3Q14832 879 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 CCDC6Q16204 474 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 PPP2R5EQ16537 467 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 GDPD4Q6W3E5 623 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ERN2Q76MJ5 926 aaKnown RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 SRLQ86TD4 932 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 CCDC13Q8IYE1 715 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ALG3Q92685 438 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ARRDC3Q96B67 414 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 HDAC11Q96DB2 347 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 LRIG1Q96JA1 1093 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 KLHL32Q96NJ5 620 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 LGMNQ99538 433 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 OSBPL8Q9BZF1 889 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ARRDC1-AS1Q9H2J1 176 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms