RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 RNF135Q8IUD6 432 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 TTC9BQ8N6N2 239 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 CMTM5Q96DZ9 223 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 ELMO2Q96JJ3 720 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 ZIC5Q96T25 663 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 ANGPTL2Q9UKU9 493 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 SSX2IPQ9Y2D8 614 aa16.83■□□□□ 0.29
CHFR-203ENST00000432561 PATJQ8NI35 1801 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 DLX3O60479 287 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 SOAT2O75908 522 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 TBX18O95935 607 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 LINGO3P0C6S8 592 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 AP2B1P63010 937 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 TBL3Q12788 808 aaKnown RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 GRIK3Q13003 919 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 CCNIQ14094 377 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 KCNA10Q16322 511 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 PIK3R6Q5UE93 754 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 CNSTQ6PJW8 725 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 PPHLN1Q8NEY8 458 aaKnown RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 ZNF184Q99676 751 aaPredicted RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 SMOC2Q9H3U7 446 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 NOL6Q9H6R4 1146 aaKnown RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 DLGAP2Q9P1A6 1054 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 LRCH1Q9Y2L9 728 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 PRG3Q9Y2Y8 225 aaPredicted RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 TCAF1Q9Y4C2 921 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 COL4A4P53420 1690 aaPredicted RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 TMEM114B3SHH9 223 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 J3KR12 359 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 MATN2O00339 956 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 ZNF623O75123 536 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 GJB3O75712 270 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 ANXA9O76027 345 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 DDHD2O94830 711 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 PSEN1P49768 467 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 USP46P62068 366 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 ITKQ08881 620 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 SLC12A1Q13621 1099 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 IHHQ14623 411 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 TSTD2Q5T7W7 516 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 NXNQ6DKJ4 435 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 LDB1Q86U70 411 aaPredicted RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 LSMEM2Q8N112 164 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 THEM5Q8N1Q8 247 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 TSNARE1Q96NA8 513 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 CATSPER2Q96P56 530 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 HAPLN3Q96S86 360 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 CATSPERBQ9H7T0 1116 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 IPO11Q9UI26 975 aaKnown RBP16.83■□□□□ 0.28
CHFR-203ENST00000432561 ACOT9Q9Y305 439 aa16.83■□□□□ 0.28
CHFR-203ENST00000432561 DOCK4Q8N1I0 1966 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 FNDC1Q4ZHG4 1894 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 A6NHS1 94 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 GRID2O43424 1007 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 CNTN5O94779 1100 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 SKIP12755 728 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 TFEBP19484 476 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 ADRA1AP35348 466 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 RAB10P61026 200 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 DSC3Q14574 896 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 LPCAT4Q643R3 524 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 STYXQ8WUJ0 223 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 B3GALT6Q96L58 329 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 DRC3Q9H069 523 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 CYP4F12Q9HCS2 524 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 NMRK2Q9NPI5 230 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 POMPQ9Y244 141 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 MANSC4A6NHS7 340 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 HAPLN1P10915 354 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 STMN1P16949 149 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 GLDCP23378 1020 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 CCND3P30281 292 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 NUDT2P50583 147 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 ZNF135P52742 658 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 BRMS1LQ5PSV4 323 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 SEL1L3Q68CR1 1132 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 SNX32Q86XE0 403 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 ZNF354CQ86Y25 554 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 ACTRT2Q8TDY3 377 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 SREK1Q8WXA9 508 aaKnown RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 SUSD3Q96L08 255 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 GPR78Q96P69 363 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 DDX50Q9BQ39 737 aaKnown RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 FAM96AQ9H5X1 160 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 SUDS3Q9H7L9 328 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 S100A14Q9HCY8 104 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 NT5MQ9NPB1 228 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 CORO1CQ9ULV4 474 aaPredicted RBP16.82■□□□□ 0.28
CHFR-203ENST00000432561 RAP2CQ9Y3L5 183 aa16.82■□□□□ 0.28
CHFR-203ENST00000432561 MKI67P46013 3256 aaKnown RBP16.81■□□□□ 0.28
CHFR-203ENST00000432561 TARM1B6A8C7 271 aa16.81■□□□□ 0.28
CHFR-203ENST00000432561 UBTFL6P0CB48 400 aaPredicted RBP16.81■□□□□ 0.28
CHFR-203ENST00000432561 MYL4P12829 197 aa16.81■□□□□ 0.28
CHFR-203ENST00000432561 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHFR-203ENST00000432561 FLT3LGP49771 235 aa16.81■□□□□ 0.28
CHFR-203ENST00000432561 WNT3AP56704 352 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms