RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ODF2Q5BJF6 829 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 ANKRD20A8PQ5CZ79 823 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TMCO4Q5TGY1 634 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 AGBL4Q5VU57 503 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TBC1D3GQ6DHY5 549 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TBC1D3CQ6IPX1 549 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TCEAL6Q6IPX3 200 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 RAD9BQ6WBX8 426 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 ERN2Q76MJ5 926 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TBC1D3Q8IZP1 549 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 NETO1Q8TDF5 533 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 TCEAL3Q969E4 200 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 BIRC7Q96CA5 298 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 ZNF599Q96NL3 588 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 MIR1-1HGQ9H1L0 117 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 ETNK2Q9NVF9 386 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 DDX56Q9NY93 547 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 EIF2B4Q9UI10 523 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 MFHAS1Q9Y4C4 1052 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 NUP205Q92621 2012 aa17.65■□□□□ 0.42
CTDSP1-203ENST00000431127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 LRRD1A4D1F6 860 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 BTNL10A8MVZ5 291 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 PATE3B3GLJ2 98 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 BCAT2O15382 392 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 BUB1BO60566 1050 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 COMTP21964 271 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 KDELR1P24390 212 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 NEK3P51956 506 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 IRX4P78413 519 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 GRM3Q14832 879 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 ZNF805Q5CZA5 627 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 ATXN7L2Q5T6C5 722 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 PIP5KL1Q5T9C9 394 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 TMEM139Q8IV31 216 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 ATPAF2Q8N5M1 289 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 PCDH19Q8TAB3 1148 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 NSMCE1Q8WV22 266 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 ARRDC3Q96B67 414 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 KLHL11Q9NVR0 708 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 ALG6Q9Y672 507 aa17.64■□□□□ 0.41
CTDSP1-203ENST00000431127 NUMA1Q14980 2115 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 NYNRINQ9P2P1 1898 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 CEP192Q8TEP8 1941 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 LNP1A1A4G5 178 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 PLK4O00444 970 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 IGHV4-34P06331 123 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 SYPP08247 313 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 NUDT1P36639 197 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 RENBPP51606 427 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 VAV2P52735 878 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 LIMK1P53667 647 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 PAFAH1B3Q15102 231 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 C11orf63Q6NUN7 778 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 NEK5Q6P3R8 708 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 FBXL19Q6PCT2 694 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 OR6K2Q8NGY2 324 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 RAPGEF5Q92565 580 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 RTKNQ9BST9 563 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 EDEM2Q9BV94 578 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 CINPQ9BW66 212 aaPredicted RBP17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 CPEB1Q9BZB8 566 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 CAPN10Q9HC96 672 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 LHX3Q9UBR4 397 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 SEPT3Q9UH03 358 aa17.63■□□□□ 0.41
CTDSP1-203ENST00000431127 A0A1W2PPC4 97 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 DCDC2BA2VCK2 349 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 C10orf142B7Z368 130 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 PSTPIP1O43586 416 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 MAFKO60675 156 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 CSNK1DP48730 415 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 AFF3P51826 1226 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 NSUN2Q08J23 767 aaKnown RBP eCLIP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 LBRQ14739 615 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 NCBP2-AS2Q69YL0 99 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 GDPD4Q6W3E5 623 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 ARHGAP36Q6ZRI8 547 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 TRIM69Q86WT6 500 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 TP53INP2Q8IXH6 220 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 BBS5Q8N3I7 341 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 ZCCHC9Q8N567 271 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 NETO2Q8NC67 525 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 C1orf216Q8TAB5 229 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 RAB7BQ96AH8 199 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 RNF157Q96PX1 679 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 PSKH2Q96QS6 385 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 TUBGCP5Q96RT8 1024 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 MAK16Q9BXY0 300 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 ZDHHC5Q9C0B5 715 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 TFR2Q9UP52 801 aa17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 REXO2Q9Y3B8 237 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 TNRC6BQ9UPQ9 1833 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-203ENST00000431127 C16orf96A6NNT2 1141 aa17.61■□□□□ 0.41
CTDSP1-203ENST00000431127 LATO43561 262 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms