RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 NEUROG2Q9H2A3 272 aa25.5■■□□□ 1.67
CPNE1-212ENST00000430570 SCML1Q9UN30 329 aa25.5■■□□□ 1.67
CPNE1-212ENST00000430570 TTC24A2A3L6 582 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 C1QTNF3-AMACRE9PGA6 284 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 POP4O95707 220 aaKnown RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 PRNPP04156 253 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 DRD3P35462 400 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 CETN2P41208 172 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 HNRNPDQ14103 355 aaKnown RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 LPAL2Q16609 132 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 TTC31Q49AM3 519 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 ZNF569Q5MCW4 686 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 MARC1Q5VT66 337 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 FAM46CQ5VWP2 391 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 PRR23BQ6ZRT6 265 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 GANCQ8TET4 914 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 NSMCE1Q8WV22 266 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 P3H4Q92791 437 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 FATE1Q969F0 183 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 TOE1Q96GM8 510 aaKnown RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 SPACA7Q96KW9 195 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 EPC1Q9H2F5 836 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 WSB2Q9NYS7 404 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-212ENST00000430570 PLXND1Q9Y4D7 1925 aa25.49■■□□□ 1.67
CPNE1-212ENST00000430570 NUMA1Q14980 2115 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 APOC4-APOC2K7ER74 178 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 KPNA3O00505 521 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-212ENST00000430570 APOC2P02655 101 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 CD6P30203 668 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 ACSL1P33121 698 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 MMP13P45452 471 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 MAXP61244 160 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 AP1B1Q10567 949 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 ZNF235Q14590 738 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 PLK5Q496M5 336 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 USP30Q70CQ3 517 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 SRLQ86TD4 932 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 DEFB119Q8N690 84 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 OMDQ99983 421 aa25.48■■□□□ 1.67
CPNE1-212ENST00000430570 DUSP15Q9H1R2 295 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-212ENST00000430570 TCRBV7S2A1N4TA0A589 114 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 KCNK1O00180 336 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 ENC1O14682 589 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 PPP1R12AO14974 1030 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 RNASEH2AO75792 299 aaKnown RBP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 CCNB1P14635 433 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 OXTRP30559 389 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 CSNK1DP48730 415 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 NSUN2Q08J23 767 aaKnown RBP eCLIP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 CNTN1Q12860 1018 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 BZW1Q7L1Q6 419 aaKnown RBP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 ZC3H18Q86VM9 953 aaKnown RBP25.47■■□□□ 1.67
CPNE1-212ENST00000430570 SLC35F6Q8N357 371 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 SUMF1Q8NBK3 374 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 NT5MQ9NPB1 228 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 RBM22Q9NW64 420 aaKnown RBP eCLIP25.47■■□□□ 1.671e-6■■□□□ 12.5
CPNE1-212ENST00000430570 NCKAP1Q9Y2A7 1128 aa25.47■■□□□ 1.67
CPNE1-212ENST00000430570 KCNK3O14649 394 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 MAP3K13O43283 966 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 TJP3O95049 919 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 PIGNO95427 931 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 UGT2B4P06133 528 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 CR2P20023 1033 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 SCNN1BP51168 640 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 RENBPP51606 427 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 OTUD4Q01804 1114 aaKnown RBP25.46■■□□□ 1.67
CPNE1-212ENST00000430570 PRKD1Q15139 912 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-212ENST00000430570 NOMO1Q15155 1222 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 CCDC181Q5TID7 509 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 ACTL9Q8TC94 416 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 ZC3H10Q96K80 434 aaKnown RBP25.46■■□□□ 1.67
CPNE1-212ENST00000430570 FAM118BQ9BPY3 351 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 MGME1Q9BQP7 344 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 CPEB1Q9BZB8 566 aaKnown RBP25.46■■□□□ 1.67
CPNE1-212ENST00000430570 USP34Q70CQ2 3546 aa25.46■■□□□ 1.67
CPNE1-212ENST00000430570 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 JCHAINP01591 159 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 RAD51Q06609 339 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 ZNF33AQ06730 810 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 ZBTB17Q13105 803 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 KLF1Q13351 362 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-212ENST00000430570 GDPD4Q6W3E5 623 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 SLC36A4Q6YBV0 504 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 TMEFF1Q8IYR6 380 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 BBS5Q8N3I7 341 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 FAM131CQ96AQ9 280 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 LRIG1Q96JA1 1093 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 KLHL32Q96NJ5 620 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 IL12RB2Q99665 862 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 GPR174Q9BXC1 333 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 BTBD1Q9H0C5 482 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 BRD8Q9H0E9 1235 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 CARD9Q9H257 536 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 C10orf88Q9H8K7 445 aa25.45■■□□□ 1.66
CPNE1-212ENST00000430570 KIF5CO60282 957 aa25.44■■□□□ 1.66
CPNE1-212ENST00000430570 HLA-DQB2P05538 268 aa25.44■■□□□ 1.66
CPNE1-212ENST00000430570 HSPA9P38646 679 aaKnown RBP25.44■■□□□ 1.66
CPNE1-212ENST00000430570 IFI35P80217 286 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-212ENST00000430570 RPL6Q02878 288 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms