RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 AP5M1Q9H0R1 490 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CDH19Q9H159 772 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 WDR41Q9HAD4 459 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 TRPC7Q9HCX4 862 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SARS2Q9NP81 518 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 RBM22Q9NW64 420 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-205ENST00000429411 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 BCAP29Q9UHQ4 241 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CRYL1Q9Y2S2 319 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 RNF103-CHMP3A0A140T963 221 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NCF1BA6NI72 391 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 NCF1CA8MVU1 366 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 TREHO43280 583 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NCF1P14598 390 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 ARSAP15289 507 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 HDCP19113 662 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 ITGAXP20702 1163 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 IGFBP6P24592 240 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 PTPN3P26045 913 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 GRIK1P39086 918 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 CCNFP41002 786 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 RPL14P50914 215 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 CDH13P55290 713 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SPANXN3Q5MJ09 141 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 C17orf99Q6UX52 265 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 C16orf89Q6UX73 402 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MIB1Q86YT6 1006 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 PPHLN1Q8NEY8 458 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 SENP6Q9GZR1 1112 aaPredicted RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 POMKQ9H5K3 350 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 MPP6Q9NZW5 540 aa8.17□□□□□ -1.1
HPS4-205ENST00000429411 RPL26L1Q9UNX3 145 aaKnown RBP8.17□□□□□ -1.1
HPS4-205ENST00000429411 IGKV6-21A0A0C4DH24 114 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 A0A1B0GVG6 124 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 MEIS3P2A8K0S8 358 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 LIN7AO14910 233 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 XRCC1P18887 633 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 TFEBP19484 476 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 THOP1P52888 689 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FAM83EQ2M2I3 478 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 PLEKHG6Q3KR16 790 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 CCDC153Q494R4 210 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 TEX44Q53QW1 395 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 MFSD14CQ5VZR4 134 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FAM219BQ5XKK7 198 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FAAH2Q6GMR7 532 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 ESRP1Q6NXG1 681 aaKnown RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 MARK2Q7KZI7 788 aaKnown RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 ZDHHC17Q8IUH5 632 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 DSELQ8IZU8 1212 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FBXW8Q8N3Y1 598 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 OLFM3Q96PB7 478 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 RBBP8Q99708 897 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 PCDHAC1Q9H158 963 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 RHBDL2Q9NX52 303 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 EMCNQ9ULC0 261 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 LINC00854A0A1B0GVQ3 168 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 SAC3D1A6NKF1 404 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 F8W8V4 182 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 KLF11O14901 512 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 HDAC3O15379 428 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 AHCYL1O43865 530 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 TPPPO94811 219 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 DDHD2O94830 711 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 EDNRBP24530 442 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 PTPN9P43378 593 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 LILRA4P59901 499 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 INCA1Q0VD86 236 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 ANO4Q32M45 955 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 HSF5Q4G112 596 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 NOL9Q5SY16 702 aaKnown RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 KLC3Q6P597 504 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 OSTM1Q86WC4 334 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 TLE6Q9H808 572 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 NT5MQ9NPB1 228 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 DSEQ9UL01 958 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FZD10Q9ULW2 581 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 VCANP13611 3396 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 MCM3APO60318 1980 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 C15orf38-AP3S2A0A0A6YYH1 394 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 CAPN14A8MX76 684 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 KCNU1A8MYU2 1149 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 GIPC1O14908 333 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 GABBR2O75899 941 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 CD1EP15812 388 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 SMPD1P17405 629 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 TRPC1P48995 793 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 SCNN1GP51170 649 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 RAP1GDS1P52306 607 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 MAPK10P53779 464 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 TPD52P55327 224 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 ROR2Q01974 943 aaKnown RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 PLOD1Q02809 727 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms