RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 GIPC1O14908 333 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 MUSKO15146 869 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SLC7A4O43246 635 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SPINT1O43278 529 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 LATO43561 262 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 MTA2O94776 668 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 PEX11BO96011 259 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 ITIH2P19823 946 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SDHBP21912 280 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 ABL2P42684 1182 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SSR1P43307 286 aaKnown RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 RECQLP46063 649 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 CCR5P51681 352 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 CDH6P55285 790 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SFSWAPQ12872 951 aaKnown RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 DPYSL3Q14195 570 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 MESDQ14696 234 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 MYLK3Q32MK0 819 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 INO80DQ53TQ3 878 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 ERN2Q76MJ5 926 aaKnown RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 RYBPQ8N488 228 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 RAPGEF5Q92565 580 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 KLK6Q92876 244 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 HDAC8Q9BY41 377 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 UBA2Q9UBT2 640 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 GGT7Q9UJ14 662 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 ZFR2Q9UPR6 939 aaKnown RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 CA5BQ9Y2D0 317 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 HYOU1Q9Y4L1 999 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 SNX11Q9Y5W9 270 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 PLXNA2O75051 1894 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 NCOR2Q9Y618 2525 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 A0A1W2PQU0 124 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 A0A1W2PR77 199 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ARHGAP42A6NI28 874 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 SOWAHDA6NJG2 315 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 C16orf96A6NNT2 1141 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 KRIT1O00522 736 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 BUB1BO60566 1050 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 RNGTTO60942 597 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 PIGNO95427 931 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 LCA5LO95447 670 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 UGT2B4P06133 528 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ADRB3P13945 408 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 CD59P13987 128 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 FECHP22830 423 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ITGB7P26010 798 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 MAN1A1P33908 653 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ARL4AP40617 200 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 AFF3P51826 1226 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ZNF135P52742 658 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 GEMIN4P57678 1058 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 RHOAP61586 193 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 SNRPD1P62314 119 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 FGL2Q14314 439 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 KRT81Q14533 505 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 HLA-BQ31612 363 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 LRRC73Q5JTD7 316 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 PRAMEF14Q5SWL7 426 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 SEL1L3Q68CR1 1132 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 RABEPKQ7Z6M1 372 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 TRIM69Q86WT6 500 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 PQLC3Q8N755 202 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 TSEN2Q8NCE0 465 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 PCDH19Q8TAB3 1148 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 CASKIN2Q8WXE0 1202 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 KLHL32Q96NJ5 620 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 KDM4CQ9H3R0 1056 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 GOLPH3Q9H4A6 298 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 CAAP1Q9H8G2 361 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 DNAAF2Q9NVR5 837 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 IPO11Q9UI26 975 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 ITM2BQ9Y287 266 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 FNDC3AQ9Y2H6 1198 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 REXO2Q9Y3B8 237 aaKnown RBP10.9□□□□□ -0.66
ATG4B-210ENST00000428861 FADS3Q9Y5Q0 445 aa10.9□□□□□ -0.66
ATG4B-210ENST00000428861 SPEGQ15772 3267 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 MFSD11O43934 449 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 MAFKO60675 156 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 KCNK5O95279 499 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 POP4O95707 220 aaKnown RBP10.89□□□□□ -0.67
ATG4B-210ENST00000428861 IGSF6O95976 241 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 SYPP08247 313 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 PRLRP16471 622 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 CTSKP43235 329 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 MAGEA1P43355 309 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 GRIA4P48058 902 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 NEK3P51956 506 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 RACK1P63244 317 aaKnown RBP10.89□□□□□ -0.67
ATG4B-210ENST00000428861 IL10RBQ08334 325 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 SLC10A7Q0GE19 358 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
ATG4B-210ENST00000428861 HADHQ16836 314 aaKnown RBP10.89□□□□□ -0.67
ATG4B-210ENST00000428861 ZNF284Q2VY69 593 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms