RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 IER2Q9BTL4 223 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 TSPYL1Q9H0U9 437 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 FAM153AQ9UHL3 310 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 TPX2Q9ULW0 747 aaKnown RBP12.23□□□□□ -0.45
HDLBP-215ENST00000427487 SHOC2Q9UQ13 582 aa12.23□□□□□ -0.45
HDLBP-215ENST00000427487 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-215ENST00000427487 UNC80Q8N2C7 3258 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 CHURC1-FNTBB4DL54 471 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 DNALI1O14645 258 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 SMAD6O43541 496 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 AP2A1O95782 977 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 MLNP12872 115 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ADCY8P40145 1251 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 CTSOP43234 321 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 MAGEA9P43362 315 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 RPL26P61254 145 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 SARNPP82979 210 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 GPS1Q13098 491 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 CALCOCO2Q13137 446 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ELAVL3Q14576 367 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ZNF234Q14588 700 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 PON2Q15165 354 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 CARD16Q5EG05 197 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 KCTD11Q693B1 232 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 NCEH1Q6PIU2 408 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 LINGO4Q6UY18 593 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 LINC00523Q86TU6 105 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 PGBD5Q8N414 524 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 RPL10LQ96L21 214 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ZNF641Q96N77 438 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 OSBPL1AQ9BXW6 950 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 C10orf88Q9H8K7 445 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 LRRC40Q9H9A6 602 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 ARNT2Q9HBZ2 717 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 FBRSL1Q9HCM7 1045 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 GDF3Q9NR23 364 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 RAB6BQ9NRW1 208 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 SLCO3A1Q9UIG8 710 aa12.22□□□□□ -0.45
HDLBP-215ENST00000427487 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
HDLBP-215ENST00000427487 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 MUSKO15146 869 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 CTIFO43310 598 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 METTL18O95568 372 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 ZSCAN5DPP0CG00 497 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 ETS1P14921 441 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 NFKB1P19838 968 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 PSMB4P28070 264 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 NTSR1P30989 418 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 STK19P49842 368 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 TERF1P54274 439 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 CAMK2GQ13555 558 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 KCNJ11Q14654 390 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 MYLK3Q32MK0 819 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 FNDC3BQ53EP0 1204 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 TEX35Q5T0J7 233 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 RNASEH2BQ5TBB1 312 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 NAPEPLDQ6IQ20 393 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SDE2Q6IQ49 451 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 WDR93Q6P2C0 686 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SERPINA13PQ6UXR4 307 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 CEP128Q6ZU80 1094 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 DSG4Q86SJ6 1040 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SRLQ86TD4 932 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 PRPF39Q86UA1 669 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 NAT8LQ8N9F0 302 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 LRRN4CLQ8ND94 238 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 TMIEQ8NEW7 156 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 MYRIPQ8NFW9 859 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 OR2A12Q8NGT7 310 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 USP33Q8TEY7 942 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 CYB5D2Q8WUJ1 264 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 PTPRN2Q92932 1015 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SEMA3CQ99985 751 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 TRIM51Q9BSJ1 452 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 ETNK1Q9HBU6 452 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 DMGDHQ9UI17 866 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 FBXL21Q9UKT6 434 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 HCN2Q9UL51 889 aa12.21□□□□□ -0.45
HDLBP-215ENST00000427487 FCF1Q9Y324 198 aaKnown RBP12.21□□□□□ -0.45
HDLBP-215ENST00000427487 CKAP5Q14008 2032 aa12.21□□□□□ -0.46
HDLBP-215ENST00000427487 NCOR1O75376 2440 aa12.2□□□□□ -0.46
HDLBP-215ENST00000427487 TCF20Q9UGU0 1960 aaKnown RBP12.2□□□□□ -0.46
HDLBP-215ENST00000427487 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
HDLBP-215ENST00000427487 K7ERQ8 282 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms