RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 GALNT15Q8N3T1 639 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 OR1N1Q8NGS0 311 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 CTCFLQ8NI51 663 aaPredicted RBP4.88□□□□□ -1.63
LINC01040-201ENST00000425048 OR1F2PQ96R84 312 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 ACAD9Q9H845 621 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 SEPSECSQ9HD40 501 aaKnown RBP4.88□□□□□ -1.63
LINC01040-201ENST00000425048 GRHL1Q9NZI5 618 aa4.88□□□□□ -1.63
LINC01040-201ENST00000425048 ANO9A1A5B4 782 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 AQP12BA6NM10 295 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 PMS2P2O95744 297 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 CFC1BP0CG36 223 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 CFC1P0CG37 223 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 LYL1P12980 280 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 AK2P54819 239 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 RAB11FIP2Q7L804 512 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 FAM71BQ8TC56 605 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 LRRC8CQ8TDW0 803 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 STYXQ8WUJ0 223 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 TRIB2Q92519 343 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 CPT1BQ92523 772 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 C1QTNF5Q9BXJ0 243 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 LRFN1Q9P244 771 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 UPB1Q9UBR1 384 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 PHTF1Q9UMS5 762 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 DAPP1Q9UN19 280 aa4.87□□□□□ -1.63
LINC01040-201ENST00000425048 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 TIMM23O14925 209 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 STRNO43815 780 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE7O76087 117 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE12FP0CL80 117 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE12GP0CL81 117 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE12IP0CL82 117 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GYS1P13807 737 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 CHN1P15882 459 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 DCTDP32321 178 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 ZNF132P52740 706 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 ERVK11-1P61568 191 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE1Q13065 139 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 GAGE4Q13068 117 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 PTK2BQ14289 1009 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 SPARCL1Q14515 664 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 FOXL2NBQ6ZUU3 175 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 KLHDC8BQ8IXV7 354 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 AADATQ8N5Z0 425 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 PTGR2Q8N8N7 351 aaPredicted RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 WDSUB1Q8N9V3 476 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 OTUD7AQ8TE49 926 aaPredicted RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 ATOH1Q92858 354 aaPredicted RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 CLPBQ9H078 707 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 ELAC1Q9H777 363 aaKnown RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 MVB12BQ9H7P6 319 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 FBXO40Q9UH90 709 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 C19orf53Q9UNZ5 99 aaPredicted RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 RCE1Q9Y256 329 aa4.86□□□□□ -1.63
LINC01040-201ENST00000425048 MORC2Q9Y6X9 1032 aaPredicted RBP4.86□□□□□ -1.63
LINC01040-201ENST00000425048 FAM157AC9JC47 383 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 P2RY10O00398 339 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 CBX6O95503 412 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 ABCB4P21439 1286 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 MYF6P23409 242 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 AVPR2P30518 371 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 SSTR2P30874 369 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 GALNTL6Q49A17 601 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 CCDC181Q5TID7 509 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 MARK2Q7KZI7 788 aaKnown RBP4.85□□□□□ -1.63
LINC01040-201ENST00000425048 SPEM1Q8N4L4 309 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 STT3BQ8TCJ2 826 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 PARD3BQ8TEW8 1205 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 USP13Q92995 863 aaPredicted RBP4.85□□□□□ -1.63
LINC01040-201ENST00000425048 EID2BQ96D98 161 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 LRFN5Q96NI6 719 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 MMTAG2Q9BU76 263 aaKnown RBP4.85□□□□□ -1.63
LINC01040-201ENST00000425048 TRMT61BQ9BVS5 477 aaKnown RBP4.85□□□□□ -1.63
LINC01040-201ENST00000425048 EGLN1Q9GZT9 426 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 SCRT2Q9NQ03 307 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 SMARCAL1Q9NZC9 954 aa4.85□□□□□ -1.63
LINC01040-201ENST00000425048 GOLGA6L3A6NEY3 463 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 TNFRSF6BO95407 300 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 APOHP02749 345 aaPredicted RBP4.84□□□□□ -1.63
LINC01040-201ENST00000425048 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 NLRP5P59047 1200 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 ECT2LQ008S8 904 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 FAM27E3Q08E93 113 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 LPIN1Q14693 890 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 SETMARQ53H47 684 aaPredicted RBP4.84□□□□□ -1.63
LINC01040-201ENST00000425048 OR4N2Q8NGD1 307 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 EBF2Q9HAK2 575 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 CHST12Q9NRB3 414 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 NDUFAF4Q9P032 175 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 TCF19Q9Y242 345 aa4.84□□□□□ -1.63
LINC01040-201ENST00000425048 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
LINC01040-201ENST00000425048 FGF17O60258 216 aa4.83□□□□□ -1.64
LINC01040-201ENST00000425048 ZG16O60844 167 aa4.83□□□□□ -1.64
LINC01040-201ENST00000425048 ATP1A1P05023 1023 aaKnown RBP4.83□□□□□ -1.64
LINC01040-201ENST00000425048 KCNA5P22460 613 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms