RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ZBTB17Q13105 803 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 SV2CQ496J9 727 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 CERCAMQ5T4B2 595 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 IYDQ6PHW0 289 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 POTEHQ6S545 545 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 GALNT7Q86SF2 657 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 COLGALT2Q8IYK4 626 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 SLC2A14Q8TDB8 520 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 PBXIP1Q96AQ6 731 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 EME1Q96AY2 570 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 WDR6Q9NNW5 1121 aaKnown RBP15.41■□□□□ 0.06
C9orf3-204ENST00000424143 TMEM181Q9P2C4 612 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 COL4A4P53420 1690 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 C7orf72A4D263 438 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 NEMP1O14524 444 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 CFLARO15519 480 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 HSPA8P11142 646 aaKnown RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 NPR3P17342 541 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 TTKP33981 857 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 HTR7P34969 479 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 TAF6P49848 677 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 NUP107P57740 925 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 TPI1P60174 286 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 POU4F1Q01851 419 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 ARL13BQ3SXY8 428 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 INTS11Q5TA45 600 aaKnown RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 IL23RQ5VWK5 629 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 APPL2Q8NEU8 664 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 COPS5Q92905 334 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 C18orf25Q96B23 403 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 ROPN1LQ96C74 230 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 SCYL1Q96KG9 808 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 CYP2S1Q96SQ9 504 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 CCT7Q99832 543 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 SLC25A23Q9BV35 468 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 COQ10BQ9H8M1 238 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 VTA1Q9NP79 307 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 PIH1D1Q9NWS0 290 aaKnown RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 CACNA2D2Q9NY47 1150 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 TUBGCP4Q9UGJ1 667 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 APPL1Q9UKG1 709 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 CDH7Q9ULB5 785 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
C9orf3-204ENST00000424143 TANC1Q9C0D5 1861 aa15.4■□□□□ 0.06
C9orf3-204ENST00000424143 A0A0J9YVX5 310 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 BBIP1A8MTZ0 92 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 KCNK1O00180 336 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 AHSGP02765 367 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 VTNP04004 478 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CD1EP15812 388 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 STMN1P16949 149 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 NMBRP28336 390 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CYP2C18P33260 490 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 GMPRP36959 345 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ADIGQ0VDE8 80 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 TSTD2Q5T7W7 516 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 NXNQ6DKJ4 435 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PRMT9Q6P2P2 845 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 NOTUMQ6P988 496 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 TERB1Q8NA31 727 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ACVR1CQ8NER5 493 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SPPL2BQ8TCT7 592 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 KCTD4Q8WVF5 259 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 FCRL5Q96RD9 977 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 RHOBTB2Q9BYZ6 727 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ADAMTS10Q9H324 1103 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CLK4Q9HAZ1 481 aaKnown RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SPAG4Q9NPE6 437 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CHRAC1Q9NRG0 131 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PIGVQ9NUD9 493 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 OLAHQ9NV23 265 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PCDHGB4Q9UN71 923 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PCDHGB5Q9Y5G0 923 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SBF1O95248 1867 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 NRCAMQ92823 1304 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CCDC160A6NGH7 325 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 RRN3P2A6NIE6 340 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 AQP12BA6NM10 295 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 F5H423 210 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 H3BSA7 217 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ANXA9O76027 345 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 AMHP03971 560 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PYGLP06737 847 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ATP6V1B1P15313 513 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 NFKB1P19838 968 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 GABRB3P28472 473 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SLC26A3P40879 764 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 IREB2P48200 963 aaKnown RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ARCN1P48444 511 aaKnown RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 ADARP55265 1226 aaKnown RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 IGBP1P78318 339 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PFKPQ01813 784 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 VGLL4Q14135 290 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PM20D1Q6GTS8 502 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 SLC22A9Q8IVM8 553 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms