RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TBC1D31Q96DN5 1066 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 C11orf70Q9BRQ4 267 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 USP29Q9HBJ7 922 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 TAB2Q9NYJ8 693 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 DNAI1Q9UI46 699 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 PCDHB1Q9Y5F3 818 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 ACTL7AQ9Y615 435 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 POM121BA6NF01 834 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 C16orf96A6NNT2 1141 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 KRIT1O00522 736 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 SCAMP1O15126 338 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 OPA1O60313 960 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 NEBLO76041 1014 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 GP1BAP07359 652 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 RHOQP17081 205 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ACVRL1P37023 503 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 CDR2Q01850 454 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 NRG1Q02297 640 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 PDE1CQ14123 709 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 FGL2Q14314 439 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ZCCHC8Q6NZY4 707 aaKnown RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF548Q8NEK5 533 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 OR2AP1Q8NGE2 309 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 LGMNQ99538 433 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ABCG4Q9H172 646 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 GANQ9H2C0 597 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 GPR27Q9NS67 375 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 TMEM248Q9NWD8 314 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 NOCTQ9UK39 431 aaKnown RBP16.42■□□□□ 0.22
COL18A1-205ENST00000423214 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
COL18A1-205ENST00000423214 SPTY2D1-AS1A0A0U1RR47 76 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 CXorf51AA0A1B0GTR3 108 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 K7ESM1 405 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 RAD51BO15315 384 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 TSPAN6O43657 245 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 RAMP2O60895 175 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 GSRP00390 522 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 CSF2P04141 144 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 UGT2B4P06133 528 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 GIMD1P0DJR0 217 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 NME1P15531 152 aaKnown RBP16.41■□□□□ 0.22
COL18A1-205ENST00000423214 MMP8P22894 467 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 ADRA1BP35368 520 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 ABL2P42684 1182 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 PCBP4P57723 403 aaKnown RBP16.41■□□□□ 0.22
COL18A1-205ENST00000423214 POLR2FP61218 127 aaKnown RBP16.41■□□□□ 0.22
COL18A1-205ENST00000423214 FMO1Q01740 532 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 FZD2Q14332 565 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF805Q5CZA5 627 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 FKBP15Q5T1M5 1219 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 ARTNQ5T4W7 220 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 MANEALQ5VSG8 457 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 TRIM72Q6ZMU5 477 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 STRADAQ7RTN6 431 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 PHLDB2Q86SQ0 1253 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 PLPP6Q8IY26 295 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 DENND6BQ8NEG7 585 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 IFI44Q8TCB0 444 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 MAPK15Q8TD08 544 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
COL18A1-205ENST00000423214 BMFQ96LC9 184 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 OSBPL1AQ9BXW6 950 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 MAGEH1Q9H213 219 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 PRORYQ9H606 182 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 RETREG1Q9H6L5 497 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 CAAP1Q9H8G2 361 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-205ENST00000423214 NDFIP2Q9NV92 336 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 NCKIPSDQ9NZQ3 722 aa16.41■□□□□ 0.22
COL18A1-205ENST00000423214 IGLON5A6NGN9 336 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 AQP9O43315 295 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 CSO75390 466 aaKnown RBP16.4■□□□□ 0.22
COL18A1-205ENST00000423214 CYP1A1P04798 512 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-205ENST00000423214 MYF5P13349 255 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 GKP32189 559 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 SOX5P35711 763 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 PTPN9P43378 593 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
COL18A1-205ENST00000423214 THOP1P52888 689 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 GABREP78334 506 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 SYCP1Q15431 976 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 CCDC14Q49A88 953 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 RAB6CQ53S08 254 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 CT47A1Q5JQC4 288 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-205ENST00000423214 LEKR1Q6ZMV7 388 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 NLRP14Q86W24 1093 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF248Q8NDW4 579 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 JOSD2Q8TAC2 188 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 FAM172AQ8WUF8 416 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 GDAP1L1Q96MZ0 367 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 LENG8Q96PV6 779 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-205ENST00000423214 SELENOOQ9BVL4 669 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 RAB6CQ9H0N0 254 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms