RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 POLD3Q15054 466 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 SYCP1Q15431 976 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 RBM43Q6ZSC3 357 aaKnown RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 Q6ZSR6 202 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 DCP2Q8IU60 420 aaKnown RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 PLPP6Q8IY26 295 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 NEK11Q8NG66 645 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 CENPIQ92674 756 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 IFT43Q96FT9 208 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 LRIG1Q96JA1 1093 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 DCBLD2Q96PD2 775 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 SELENOOQ9BVL4 669 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 CAAP1Q9H8G2 361 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 DNAJC28Q9NX36 388 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 HS3ST3A1Q9Y663 406 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 AK5Q9Y6K8 562 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 SHROOM3Q8TF72 1996 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 POM121BA6NF01 834 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 KRIT1O00522 736 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 RAMP2O60895 175 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 PAK4O96013 591 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-206ENST00000423161 GSRP00390 522 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 CALB1P05937 261 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 GPD1P21695 349 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 GKP32189 559 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 RFC1P35251 1148 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-206ENST00000423161 ABL2P42684 1182 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 INSM1Q01101 510 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-206ENST00000423161 SEMG2Q02383 582 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 CLEC16AQ2KHT3 1053 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 ZNF542PQ5EBM4 170 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 KYAT3Q6YP21 454 aaKnown RBP18.79■□□□□ 0.6
SREBF1-206ENST00000423161 LEKR1Q6ZMV7 388 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 C3orf20Q8ND61 904 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 ANKRD20A12PQ8NF67 263 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 OR2AP1Q8NGE2 309 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 RFFLQ8WZ73 363 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 NTAN1Q96AB6 310 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 BMFQ96LC9 184 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 NRSN2Q9GZP1 204 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 GPR27Q9NS67 375 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 SEPT11Q9NVA2 429 aaKnown RBP18.79■□□□□ 0.6
SREBF1-206ENST00000423161 CLCA2Q9UQC9 943 aa18.79■□□□□ 0.6
SREBF1-206ENST00000423161 C16orf96A6NNT2 1141 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 LGALS16A8MUM7 142 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 RAD51BO15315 384 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 TSPAN6O43657 245 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 UGT2B4P06133 528 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 ALPPL2P10696 532 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 HNRNPKP61978 463 aaKnown RBP eCLIP18.78■□□□□ 0.65e-10■■■□□ 18.8
SREBF1-206ENST00000423161 SNRPD1P62314 119 aaKnown RBP18.78■□□□□ 0.6
SREBF1-206ENST00000423161 E2F1Q01094 437 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 SGCGQ13326 291 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 RTP5Q14D33 572 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 ZNF805Q5CZA5 627 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 WDR59Q6PJI9 974 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 TMC6Q7Z403 805 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 SLFN11Q7Z7L1 901 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 ZNF354CQ86Y25 554 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 PHF13Q86YI8 300 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-206ENST00000423161 RAB7BQ96AH8 199 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 NLGN3Q9NZ94 848 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 GGT7Q9UJ14 662 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 ITM2BQ9Y287 266 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 LOC400499M0QZD8 3231 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 ANKRD36A6QL64 1941 aa18.78■□□□□ 0.6
SREBF1-206ENST00000423161 FASNP49327 2511 aaKnown RBP18.77■□□□□ 0.6
SREBF1-206ENST00000423161 ASXL3Q9C0F0 2248 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 IGLON5A6NGN9 336 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 NEMP1O14524 444 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 GIMD1P0DJR0 217 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 ABCG1P45844 678 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 RABIFP47224 123 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 MYL5Q02045 173 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 FZD2Q14332 565 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 ATXN7L2Q5T6C5 722 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-206ENST00000423161 KDM7AQ6ZMT4 941 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 MON1BQ7L1V2 547 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 CACTIN-AS1Q8N1I8 211 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 PYROXD2Q8N2H3 581 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 C1QTNF2Q9BXJ5 285 aa18.77■□□□□ 0.6
SREBF1-206ENST00000423161 LIMA1Q9UHB6 759 aaKnown RBP18.77■□□□□ 0.6
SREBF1-206ENST00000423161 SPTY2D1-AS1A0A0U1RR47 76 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 ANKRD62A6NC57 917 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 NEMP2A6NFY4 417 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-206ENST00000423161 SIGLEC16A6NMB1 481 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 FPGTO14772 594 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 CCP110O43303 1012 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 BUB1O43683 1085 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 TLX3O43711 291 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-206ENST00000423161 KDELR3O43731 214 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 TMCC1O94876 653 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 POP4O95707 220 aaKnown RBP18.76■□□□□ 0.59
SREBF1-206ENST00000423161 CKMT1AP12532 417 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 EPHB2P29323 1055 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 UBXN1Q04323 297 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 MYLK3Q32MK0 819 aa18.76■□□□□ 0.59
SREBF1-206ENST00000423161 SOWAHCQ53LP3 525 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms