RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	GPR174	Q9BXC1	333 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	NEUROG2	Q9H2A3	272 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	KCNF1	Q9H3M0	494 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	DYRK4	Q9NR20	520 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	NCDN	Q9UBB6	729 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	SEPT3	Q9UH03	358 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	HEY1	Q9Y5J3	304 aa		18.87	■□□□□ 0.61
DDR1-233	ENST00000421124	CST8	O60676	142 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	SEMA4F	O95754	770 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	PEX11B	O96011	259 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	RET	P07949	1114 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	CCNC	P24863	283 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	GK	P32189	559 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	DHPS	P49366	369 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	RENBP	P51606	427 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	SLC10A7	Q0GE19	358 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	ZNF235	Q14590	738 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	LLGL1	Q15334	1064 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	TIGD7	Q6NT04	549 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	BBS5	Q8N3I7	341 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	DEFB119	Q8N690	84 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	ALG3	Q92685	438 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	ARRDC3	Q96B67	414 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	HDAC11	Q96DB2	347 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	LRIG1	Q96JA1	1093 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	PSKH2	Q96QS6	385 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	EVL	Q9UI08	416 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	OTOGL	Q3ZCN5	2332 aa		18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-233	ENST00000421124	RNF103	O00237	685 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	PLK4	O00444	970 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	SLC7A4	O43246	635 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	GFRA3	O60609	400 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	EPN2	O95208	641 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	TGM2	P21980	687 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CETN2	P41208	172 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CSNK1D	P48730	415 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CNTN1	Q12860	1018 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	MARC1	Q5VT66	337 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	NPNT	Q6UXI9	565 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	ARMCX6	Q7L4S7	300 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	SLC41A1	Q8IVJ1	513 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CCNY	Q8ND76	341 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CADM4	Q8NFZ8	388 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	UBE2Q2	Q8WVN8	375 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	RUBCN	Q92622	972 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	FOXJ1	Q92949	421 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	FATE1	Q969F0	183 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	FAM131C	Q96AQ9	280 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	ALS2CR12	Q96Q35	445 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	OSBPL1A	Q9BXW6	950 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	CPEB1	Q9BZB8	566 aa	Known RBP	18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	PCED1A	Q9H1Q7	454 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	GPR179	Q6PRD1	2367 aa		18.85	■□□□□ 0.61
DDR1-233	ENST00000421124	LRRC72	A6NJI9	287 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	MATN3	O15232	486 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	DDX3Y	O15523	660 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	ITGB7	P26010	798 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HSPA9	P38646	679 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	PTGER3	P43115	390 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	MMP13	P45452	471 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	RGR	P47804	291 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	NR2C2	P49116	596 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	ZNF33A	Q06730	810 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	CCDC15	Q0P6D6	951 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HNRNPD	Q14103	355 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	GRM3	Q14832	879 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	PDK1	Q15118	436 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	AGBL4	Q5VU57	503 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	LYSMD4	Q5XG99	296 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	BZW1	Q7L1Q6	419 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	CYP2U1	Q7Z449	544 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	SRL	Q86TD4	932 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	OR14C36	Q8NHC7	312 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	MAML1	Q92585	1016 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HES6	Q96HZ4	224 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HSPA12B	Q96MM6	686 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HINFP	Q9BQA5	517 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	HDAC8	Q9BY41	377 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	EFR3B	Q9Y2G0	817 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	PCDHGA5	Q9Y5G8	931 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	GON4L	Q3T8J9	2241 aa		18.84	■□□□□ 0.61
DDR1-233	ENST00000421124	MYO15A	Q9UKN7	3530 aa		18.83	■□□□□ 0.61
DDR1-233	ENST00000421124	PPP1R12A	O14974	1030 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	MUSK	O15146	869 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	INSIG1	O15503	277 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	UGT2B4	P06133	528 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	PTPN7	P35236	360 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	ADPRH	P54922	357 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	CREB5	Q02930	508 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	ADCY2	Q08462	1091 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	PPID	Q08752	370 aa	Known RBP	18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	CCDC173	Q0VFZ6	552 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	ZNF805	Q5CZA5	627 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	SYCP2L	Q5T4T6	812 aa		18.83	■□□□□ 0.6
DDR1-233	ENST00000421124	PIP5KL1	Q5T9C9	394 aa		18.83	■□□□□ 0.6

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