RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 BCL2L1Q07817 233 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ZBTB17Q13105 803 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ELAVL3Q14576 367 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 GRM3Q14832 879 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PTPRNQ16849 979 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 P3H1Q32P28 736 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TTC31Q49AM3 519 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TEX44Q53QW1 395 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ATXN7L2Q5T6C5 722 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 FAM46CQ5VWP2 391 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 C8orf74Q6P047 294 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 KIAA1324Q6UXG2 1013 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 C4orf22Q6V702 233 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 Q6ZS52 159 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SRLQ86TD4 932 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CACUL1Q86Y37 369 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TAB3Q8N5C8 712 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PRELID2Q8N945 189 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 IL17RCQ8NAC3 791 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 TSTD1Q8NFU3 115 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 OR6K2Q8NGY2 324 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC110Q8TBZ0 833 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 GRIN3AQ8TCU5 1115 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 MAML1Q92585 1016 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 FATE1Q969F0 183 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 NKD2Q969F2 451 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PPP1R16AQ96I34 528 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 MRGPRX3Q96LB0 322 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SPATA13Q96N96 652 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ACOX2Q99424 681 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 KRT12Q99456 494 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SEMA3CQ99985 751 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 FBRSQ9HAH7 460 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 PAK5Q9P286 719 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 IL36AQ9UHA7 158 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ASIC3Q9UHC3 531 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 EVLQ9UI08 416 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 DRG1Q9Y295 367 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 SPTBN5Q9NRC6 3674 aaKnown RBP8.59□□□□□ -1.03
TRIM48-201ENST00000417545 ANKRD36A6QL64 1941 aa8.59□□□□□ -1.03
TRIM48-201ENST00000417545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 TCRBV21S2A2A0A5A6 115 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 WASH3PC4AMC7 463 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 KPNA3O00505 521 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ALOX15BO15296 676 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 INSIG1O15503 277 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ANXA9O76027 345 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 POP4O95707 220 aaKnown RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 PDGFBP01127 241 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 AOC1P19801 751 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 NFKB1P19838 968 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CD86P42081 329 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 RPS9P46781 194 aaKnown RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 PSMD8P48556 350 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CCR3P51677 355 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 DGKEP52429 567 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 TERF1P54274 439 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 EPHB1P54762 984 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 GEMP55040 296 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 DSC2Q02487 901 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CCDC15Q0P6D6 951 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 DHX34Q14147 1143 aaKnown RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CYTH1Q15438 398 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 SIX1Q15475 284 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 OASLQ15646 514 aaKnown RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 PCSK7Q16549 785 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ANKRD20A2Q5SQ80 823 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ANKRD20A1Q5TYW2 823 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ANKRD20A3Q5VUR7 823 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF776Q68DI1 518 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 MAATS1Q7Z4T9 603 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF567Q8N184 647 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 STK40Q8N2I9 435 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 SPEM1Q8N4L4 309 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 SPATA4Q8NEY3 305 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 HMGB4Q8WW32 186 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 PRCCQ92733 491 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
TRIM48-201ENST00000417545 PSKH2Q96QS6 385 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 NUDCD1Q96RS6 583 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 IL12RB2Q99665 862 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CARD6Q9BX69 1037 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 OSBPL1AQ9BXW6 950 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 GBA3Q9H227 469 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 MTG2Q9H4K7 406 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 GLOD4Q9HC38 313 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 LHX3Q9UBR4 397 aa8.58□□□□□ -1.04
TRIM48-201ENST00000417545 NCKAP1Q9Y2A7 1128 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms