RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 PDGFRAP16234 1089 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 ELAVL4P26378 380 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 IRAK1P51617 712 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HNRNPKP61978 463 aaKnown RBP eCLIP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HMGN5P82970 282 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 INCA1Q0VD86 236 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 ELAVL3Q14576 367 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 C16orf72Q14CZ0 275 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 RRAGBQ5VZM2 374 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 BSPRYQ5W0U4 402 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 KCTD16Q68DU8 428 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 PM20D1Q6GTS8 502 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 UNC93AQ86WB7 457 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HORMAD1Q86X24 394 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 Q8N9G6 341 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 XXYLT1Q8NBI6 393 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 CHST14Q8NCH0 376 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 C9orf43Q8TAL5 461 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 CLEC4CQ8WTT0 213 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 NKD1Q969G9 470 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 FUBP1Q96AE4 644 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 RNF31Q96EP0 1072 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 CPEB1Q9BZB8 566 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 ZNF358Q9NW07 568 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 TP53TG5Q9Y2B4 290 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HBS1LQ9Y450 684 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 CEP83Q9Y592 693 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 GPC6Q9Y625 555 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 CLIC4Q9Y696 253 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 PDZD2O15018 2839 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 TRPM6Q9BX84 2022 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 SHANK1Q9Y566 2161 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HIVEP1P15822 2718 aa8.86□□□□□ -0.99
NIF3L1-206ENST00000416651 HIVEP3Q5T1R4 2406 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 RP1L1Q8IWN7 2480 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 LUC7L3O95232 432 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 MT-CO1P00395 513 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 ASS1P00966 412 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 CALCAP01258 141 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 PDGFAP04085 211 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 HNRNPA2B1P22626 353 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 AKT2P31751 481 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 EPHA4P54764 986 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 ALCAMQ13740 583 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 PDE1CQ14123 709 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 ACCSLQ4AC99 568 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 PRRT3Q5FWE3 981 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 MS4A13Q5J8X5 152 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 FHL5Q5TD97 284 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 NUGGCQ68CJ6 796 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 DSG4Q86SJ6 1040 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 KDM1BQ8NB78 822 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 SLC4A11Q8NBS3 891 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 SPATA20Q8TB22 786 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 ZDHHC1Q8WTX9 485 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 PDCD6IPQ8WUM4 868 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 FCRL2Q96LA5 508 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 SPAG5Q96R06 1193 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 GFM1Q96RP9 751 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 CDK5RAP1Q96SZ6 601 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 KLF6Q99612 283 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 IL12RB2Q99665 862 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 LRRC61Q9BV99 259 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 NT5C1AQ9BXI3 368 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 SEMA6CQ9H3T2 930 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 KIAA1586Q9HCI6 787 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 GGT7Q9UJ14 662 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 FBXO2Q9UK22 296 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 ADGRG4Q8IZF6 3080 aa8.85□□□□□ -0.99
NIF3L1-206ENST00000416651 TNRC6AQ8NDV7 1962 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 A6NNZ2 444 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 K7ERQ8 282 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 SLC7A4O43246 635 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 STX6O43752 255 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 PCDH8O95206 1070 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 MOCS2O96007 188 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 TSHRP16473 764 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 OAS2P29728 719 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 TXLNAP40222 546 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 CLDN10P78369 228 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 ZFP36L1Q07352 338 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 ADIGQ0VDE8 80 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 CDH18Q13634 790 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 DLG2Q15700 870 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 SGSM1Q2NKQ1 1148 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 EIF2S3LQ2VIR3 472 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 ZACNQ401N2 412 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 MPP7Q5T2T1 576 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 RAP1GAP2Q684P5 730 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 FAM173BQ6P4H8 233 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 UNC5BQ8IZJ1 945 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 LGI2Q8N0V4 545 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 PDILTQ8N807 584 aa8.84□□□□□ -0.99
NIF3L1-206ENST00000416651 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms