RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 IL36AQ9UHA7 158 aa20.88■□□□□ 0.93
PTPRU-203ENST00000415600 NYNRINQ9P2P1 1898 aaKnown RBP20.87■□□□□ 0.93
PTPRU-203ENST00000415600 C2CD4BA6NLJ0 364 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 C10orf142B7Z368 130 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 DYNC1I1O14576 645 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 CHRNB2P17787 502 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 MAT2AP31153 395 aaKnown RBP20.87■□□□□ 0.93
PTPRU-203ENST00000415600 SERPINH1P50454 418 aaKnown RBP20.87■□□□□ 0.93
PTPRU-203ENST00000415600 GSCP56915 257 aaPredicted RBP20.87■□□□□ 0.93
PTPRU-203ENST00000415600 PPP2CBP62714 309 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 PPP2CAP67775 309 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 SLCO6A1Q86UG4 719 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 OR7D4Q8NG98 312 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 SYT11Q9BT88 431 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 MRFAP1Q9Y605 127 aa20.87■□□□□ 0.93
PTPRU-203ENST00000415600 A0A1W2PR77 199 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 UNGP13051 313 aaPredicted RBP20.86■□□□□ 0.93
PTPRU-203ENST00000415600 RHOQP17081 205 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 NXPH1P58417 271 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 IL9RQ01113 521 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 TUBB2AQ13885 445 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 CLEC16AQ2KHT3 1053 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 CCDC14Q49A88 953 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 KCNT1Q5JUK3 1230 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 LINGO4Q6UY18 593 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 PHF13Q86YI8 300 aaPredicted RBP20.86■□□□□ 0.93
PTPRU-203ENST00000415600 C3orf20Q8ND61 904 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 TUBB2BQ9BVA1 445 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 HDAC8Q9BY41 377 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 TMPRSS4Q9NRS4 437 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 BTBD3Q9Y2F9 522 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 DUSP10Q9Y6W6 482 aa20.86■□□□□ 0.93
PTPRU-203ENST00000415600 GOLGA8CPA6NN73 597 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 K7ERQ8 282 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 PLK4O00444 970 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 WNT1P04628 370 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 ATXN1LP0C7T5 689 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 GPD1P21695 349 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 AKT2P31751 481 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 DNA2P51530 1060 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 C1QBPQ07021 282 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 POLD3Q15054 466 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 TRNP1Q6NT89 227 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 CCNI2Q6ZMN8 369 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 ERN2Q76MJ5 926 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 FAM174AQ8TBP5 190 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 GRIN3AQ8TCU5 1115 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 FAM172AQ8WUF8 416 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 TBC1D31Q96DN5 1066 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 MACROD2A1Z1Q3 448 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 DDX3XO00571 662 aaKnown RBP eCLIP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 SMAD6O43541 496 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 METAP1P53582 386 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 C15orf59Q2T9L4 293 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 EFHC2Q5JST6 749 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 PIP5KL1Q5T9C9 394 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 DNAJC24Q6P3W2 148 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 ALKBH5Q6P6C2 394 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 RNF10Q8N5U6 811 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 TRIM58Q8NG06 486 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 CENPIQ92674 756 aaPredicted RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 NTAN1Q96AB6 310 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 ISG20Q96AZ6 181 aaKnown RBP20.85■□□□□ 0.93
PTPRU-203ENST00000415600 HEPHQ9BQS7 1158 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 MAGEH1Q9H213 219 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 DONSONQ9NYP3 566 aa20.85■□□□□ 0.93
PTPRU-203ENST00000415600 FRYQ5TBA9 3013 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 ZSCAN5CA6NGD5 496 aaPredicted RBP20.84■□□□□ 0.93
PTPRU-203ENST00000415600 SIGLEC16A6NMB1 481 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 BTNL10A8MVZ5 291 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 RAMP2O60895 175 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 PCDH8O95206 1070 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 C1SP09871 688 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 EPHA8P29322 1005 aaPredicted RBP20.84■□□□□ 0.93
PTPRU-203ENST00000415600 RXRGP48443 463 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 NEK3P51956 506 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 CARD16Q5EG05 197 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 ARSIQ5FYB1 569 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 FBXL19Q6PCT2 694 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 DPY19L3Q6ZPD9 716 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 TMPRSS7Q7RTY8 843 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 PHLDB2Q86SQ0 1253 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 HORMAD1Q86X24 394 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 SAP25Q8TEE9 199 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 KLHDC7BQ96G42 594 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 LRIG1Q96JA1 1093 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 AGPAT1Q99943 283 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 TNKS2Q9H2K2 1166 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 TMEM248Q9NWD8 314 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 PCDHGA1Q9Y5H4 931 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 PLXNA2O75051 1894 aa20.84■□□□□ 0.93
PTPRU-203ENST00000415600 A0A1W2PQU0 124 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 LEFTY1O75610 366 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 LDOC1O95751 146 aaPredicted RBP20.83■□□□□ 0.92
PTPRU-203ENST00000415600 CTSLP07711 333 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 AIF1P55008 147 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 CCDC157Q569K6 752 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 DCUN1D2Q6PH85 259 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 SLFN11Q7Z7L1 901 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 PLPP6Q8IY26 295 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms