RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 NCAM1P13591 858 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 KCNE1P15382 129 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■□□□□ 8
SCARB1-203ENST00000415380 CLCN2P51788 898 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 RAB10P61026 200 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 APOFQ13790 326 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 LRRC23Q53EV4 343 aaPredicted RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 SH2D4BQ5SQS7 431 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 PAOXQ6QHF9 649 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 GK5Q6ZS86 529 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 DPF3Q92784 378 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 CELF6Q96J87 481 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 MAELQ96JY0 434 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 KCNU1A8MYU2 1149 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 XPOTO43592 962 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 FAM200BP0CF97 657 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 USP41Q3LFD5 358 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 IL23RQ5VWK5 629 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 WSCD1Q658N2 575 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 GPRIN1Q7Z2K8 1008 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 SPATA22Q8NHS9 363 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 DNAJC1Q96KC8 554 aaKnown RBP18.23■□□□□ 0.51
SCARB1-203ENST00000415380 FTHL17Q9BXU8 183 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 ADA2Q9NZK5 511 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 AK5Q9Y6K8 562 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 FAM95CA0A1B0GW59 222 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 C9IYK1 514 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 IGFBP6P24592 240 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 DNAJB1P25685 340 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 GJA9P57773 515 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 ARL13BQ3SXY8 428 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 XKR4Q5GH76 650 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PKN3Q6P5Z2 889 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 LINC00523Q86TU6 105 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PCDH20Q8N6Y1 951 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 ATP6V1E2Q96A05 226 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 SGF29Q96ES7 293 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 SLC2A11Q9BYW1 496 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 AP3B1O00203 1094 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 STRNO43815 780 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 NPHS1O60500 1241 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 USP17L7P0C7H9 530 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 STMN1P16949 149 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 POU6F1Q14863 301 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 DGKDQ16760 1214 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 UGP2Q16851 508 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PCID2Q5JVF3 399 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 EGFL6Q8IUX8 553 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 CNTN4Q8IWV2 1026 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 ANKRD13AQ8IZ07 590 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 TXNDC5Q8NBS9 432 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 COLEC11Q9BWP8 271 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 OR12D3Q9UGF7 316 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 DMTF1Q9Y222 760 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PCDHGA7Q9Y5G6 932 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 ZNF26P17031 533 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PSME3P61289 254 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 CREB5Q02930 508 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 MGAT5BQ3V5L5 792 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 CNSTQ6PJW8 725 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 PELI3Q8N2H9 469 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 CEP70Q8NHQ1 597 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 ASB9Q96DX5 294 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 MRPL1Q9BYD6 325 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 MRPL46Q9H2W6 279 aaKnown RBP18.22■□□□□ 0.51
SCARB1-203ENST00000415380 GTSE1Q9NYZ3 720 aa18.22■□□□□ 0.51
SCARB1-203ENST00000415380 LRIG2O94898 1065 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 SMPD1P17405 629 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 PPIL2Q13356 520 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 ESRP1Q6NXG1 681 aaKnown RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 FAM81AQ8TBF8 368 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 PGAP3Q96FM1 320 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 SMOQ99835 787 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 TKTL2Q9H0I9 626 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 POMKQ9H5K3 350 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 CRTAC1Q9NQ79 661 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 UTP6Q9NYH9 597 aaKnown RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 NCKIPSDQ9NZQ3 722 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 EPS15L1Q9UBC2 864 aa18.21■□□□□ 0.51
SCARB1-203ENST00000415380 CNOT11Q9UKZ1 510 aaKnown RBP18.21■□□□□ 0.51
SCARB1-203ENST00000415380 TRPA1O75762 1119 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 SNAI1O95863 264 aaPredicted RBP18.21■□□□□ 0.5
SCARB1-203ENST00000415380 MT-CYBP00156 380 aaPredicted RBP18.21■□□□□ 0.5
SCARB1-203ENST00000415380 HNRNPLP14866 589 aaKnown RBP eCLIP18.21■□□□□ 0.51e-7■■■■□ 21.9
SCARB1-203ENST00000415380 ARSAP15289 507 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms