RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TOE1Q96GM8 510 aaKnown RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ZBTB45Q96K62 511 aaPredicted RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 CBWD1Q9BRT8 395 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 HEMGNQ9BXL5 484 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 MCOLN1Q9GZU1 580 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 ADAMTS10Q9H324 1103 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 AGPAT3Q9NRZ7 376 aa20.67■□□□□ 0.9
AP1S3-205ENST00000415298 MRPL39Q9NYK5 338 aaKnown RBP20.67■□□□□ 0.9
AP1S3-205ENST00000415298 B4GALT5O43286 388 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 THAP12O43422 761 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 TTKP33981 857 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 LEXMQ3ZCV2 418 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 UGT3A1Q6NUS8 523 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 LRRC55Q6ZSA7 311 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 BEND5Q7L4P6 421 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 CHERPQ8IWX8 916 aaKnown RBP20.66■□□□□ 0.9
AP1S3-205ENST00000415298 ADGRG5Q8IZF4 528 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 KIAA1958Q8N8K9 716 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 CDC26Q8NHZ8 85 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 SENP1Q9P0U3 644 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 ERVH48-1M5A8F1 160 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 RNF103O00237 685 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 EXTL3O43909 919 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 DLDP09622 509 aaKnown RBP20.66■□□□□ 0.9
AP1S3-205ENST00000415298 ABCB4P21439 1286 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 NR2F2P24468 414 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 GSTM2P28161 218 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 CASP4P49662 377 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 CDKL1Q00532 357 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 OCA2Q04671 838 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 RAD51Q06609 339 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 MRPL28Q13084 256 aaKnown RBP20.66■□□□□ 0.9
AP1S3-205ENST00000415298 SP140Q13342 867 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 KCNT1Q5JUK3 1230 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 DCAF12L1Q5VU92 463 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 KBTBD6Q86V97 674 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 ACDQ96AP0 544 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 C1QTNF7Q9BXJ2 289 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 TRIM15Q9C019 465 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 ADNPQ9H2P0 1102 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 DIABLOQ9NR28 239 aa20.66■□□□□ 0.9
AP1S3-205ENST00000415298 A0A0A6YYK5 440 aaPredicted RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 FGF18O76093 207 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 CTSHP09668 335 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 MBTD1Q05BQ5 628 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 ZNF33BQ06732 778 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 SERINC5Q86VE9 423 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 HERC6Q8IVU3 1022 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 PDPRQ8NCN5 879 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 SHKBP1Q8TBC3 707 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 FRS2Q8WU20 508 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 TSNARE1Q96NA8 513 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 TSG101Q99816 390 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 TMEM79Q9BSE2 394 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 CXorf21Q9HAI6 301 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 RNF11Q9Y3C5 154 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 HNRNPDLO14979 420 aaKnown RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 ATF4P18848 351 aaPredicted RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 CSTF2P33240 577 aaKnown RBP eCLIP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 MAPRE1Q15691 268 aaKnown RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 TBCCQ15814 346 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 C4orf46Q504U0 113 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 RDH13Q8NBN7 331 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 RMND5BQ96G75 393 aaPredicted RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 C17orf62Q9BQA9 187 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.65■□□□□ 0.9
AP1S3-205ENST00000415298 HAPLN2Q9GZV7 340 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 DPEP3Q9H4B8 488 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 MKL2Q9ULH7 1088 aa20.65■□□□□ 0.9
AP1S3-205ENST00000415298 DDX3YO15523 660 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 CLPXO76031 633 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 NR3C1P04150 777 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 CPOXP36551 454 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 CYP2J2P51589 502 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 TXNL4AP83876 142 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 STX3Q13277 289 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 ALCAMQ13740 583 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 GRIN3AQ8TCU5 1115 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 DHX38Q92620 1227 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 USB1Q9BQ65 265 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 TMEM134Q9H6X4 195 aa20.64■□□□□ 0.9
AP1S3-205ENST00000415298 CPSF3Q9UKF6 684 aaKnown RBP20.64■□□□□ 0.9
AP1S3-205ENST00000415298 CLDN25C9JDP6 229 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 ARVCFO00192 962 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 SERPINB1P30740 379 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 MARSP56192 900 aaKnown RBP20.64■□□□□ 0.89
AP1S3-205ENST00000415298 GPR85P60893 370 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 OLR1P78380 273 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 TRAF2Q12933 501 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 PLEKHG7Q6ZR37 379 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 ZBTB8OSQ8IWT0 167 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 LINC00518Q8N0U6 118 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 RHOBTB2Q9BYZ6 727 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 FZD8Q9H461 694 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 KCTD5Q9NXV2 234 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 NOD1Q9Y239 953 aa20.64■□□□□ 0.89
AP1S3-205ENST00000415298 EIF3LQ9Y262 564 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms