RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
SF3B1-204ENST00000414963 HEBP1Q9NRV9 189 aa14.46□□□□□ -0.09
SF3B1-204ENST00000414963 SLCO3A1Q9UIG8 710 aa14.46□□□□□ -0.09
SF3B1-204ENST00000414963 PLA2G4CQ9UP65 541 aa14.46□□□□□ -0.09
SF3B1-204ENST00000414963 FCF1Q9Y324 198 aaKnown RBP14.46□□□□□ -0.09
SF3B1-204ENST00000414963 PRUNE2Q8WUY3 3088 aa14.46□□□□□ -0.09
SF3B1-204ENST00000414963 KIAA1549LQ6ZVL6 1849 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GOLGA6CA6NDK9 693 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GOLGA6BA6NDN3 693 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SHISA7A6NL88 538 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 INSIG1O15503 277 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 AP2A1O95782 977 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GSRP00390 522 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GOLGA6DP0CG33 693 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 HNRNPLP14866 589 aaKnown RBP eCLIP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 ECHS1P30084 290 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 MAPK8P45983 427 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 RGRP47804 291 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GEMP55040 296 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 MAXP61244 160 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 RHOAP61586 193 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 BASP1P80723 227 aaKnown RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SKOR1P84550 965 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 DSC2Q02487 901 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 MPP3Q13368 585 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 IHHQ14623 411 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 DLG2Q15700 870 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 TXNDC11Q6PKC3 985 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SFTPA1Q8IWL2 248 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 CYB5D2Q8WUJ1 264 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SORCS1Q8WY21 1168 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 IFT81Q8WYA0 676 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 PRCCQ92733 491 aaPredicted RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 ASB2Q96Q27 587 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 MLPHQ9BV36 600 aaPredicted RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 GOLGA6AQ9NYA3 693 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 THAP10Q9P2Z0 257 aaPredicted RBP14.45□□□□□ -0.1
SF3B1-204ENST00000414963 FAM153AQ9UHL3 310 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 HCN2Q9UL51 889 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SLC8A2Q9UPR5 921 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 SORCS3Q9UPU3 1222 aa14.45□□□□□ -0.1
SF3B1-204ENST00000414963 TCRBV7S3A2A0A539 114 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 E7EVH7 732 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 K7EQS6 105 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 EPOP01588 193 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 APRTP07741 180 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 DRD1P21728 446 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 ADRA1AP35348 466 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 PLTPP55058 493 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 ST8SIA6P61647 398 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 AP1S1P61966 158 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 SNRPD1P62314 119 aaKnown RBP14.44□□□□□ -0.1
SF3B1-204ENST00000414963 VSNL1P62760 191 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 ITKQ08881 620 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 ENPP2Q13822 863 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 CARD16Q5EG05 197 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 FAXCQ5TGI0 409 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 ANKRD22Q5VYY1 191 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 C22orf39Q6P5X5 142 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 NCEH1Q6PIU2 408 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 KDELC1Q6UW63 502 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 SRLQ86TD4 932 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 TAB3Q8N5C8 712 aaPredicted RBP14.44□□□□□ -0.1
SF3B1-204ENST00000414963 OR2AP1Q8NGE2 309 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 SPATA22Q8NHS9 363 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 FBXO25Q8TCJ0 367 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 EZH1Q92800 747 aaPredicted RBP14.44□□□□□ -0.1
SF3B1-204ENST00000414963 GDAP1L1Q96MZ0 367 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 TMEM245Q9H330 911 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 LRRC40Q9H9A6 602 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 NOD2Q9HC29 1040 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 TTLL3Q9Y4R7 772 aa14.44□□□□□ -0.1
SF3B1-204ENST00000414963 WASH3PC4AMC7 463 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 MAN2B1O00754 1011 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 TMEM63AO94886 807 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 POP4O95707 220 aaKnown RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 IGSF6O95976 241 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 SERPINF2P08697 491 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 MLNP12872 115 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 CD86P42081 329 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 KIR2DL1P43626 348 aaPredicted RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 SCNN1BP51168 640 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 WNT3AP56704 352 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 SARNPP82979 210 aaKnown RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 PRKCQQ04759 706 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 GRSF1Q12849 480 aaKnown RBP eCLIP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 ZNF234Q14588 700 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 MYLK3Q32MK0 819 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 HNRNPA1L2Q32P51 320 aaKnown RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 IER5LQ5T953 404 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 FSTL4Q6MZW2 842 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 RANBP10Q6VN20 620 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 PPP1R21Q6ZMI0 780 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 LINC00523Q86TU6 105 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 ZCCHC9Q8N567 271 aaKnown RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 PDCD7Q8N8D1 485 aaKnown RBP14.43□□□□□ -0.1
SF3B1-204ENST00000414963 OR2A12Q8NGT7 310 aa14.43□□□□□ -0.1
SF3B1-204ENST00000414963 VOPP1Q96AW1 172 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms