RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZNF667Q5HYK9 610 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 EPHA10Q5JZY3 1008 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 WASHC2DQ5SRD0 308 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 ATG9BQ674R7 924 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 TECPR1Q7Z6L1 1165 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 HEATR4Q86WZ0 1026 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 RBFAQ8N0V3 343 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 TMEM199Q8N511 208 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 EVI5LQ96CN4 794 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 SEC62Q99442 399 aaKnown RBP4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 ISCUQ9H1K1 167 aa4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 WDR6Q9NNW5 1121 aaKnown RBP4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 KRCC1Q9NPI7 259 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P11-201ENST00000413899 ADGRF5Q8IZF2 1346 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 MROH2BQ7Z745 1585 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 FAM90A10PA6NDY2 464 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 B4DGG1 531 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 TNPO2O14787 897 aaKnown RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 GNLYP22749 145 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 DCTDP32321 178 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 TTKP33981 857 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 RYKP34925 604 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 RFC1P35251 1148 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 PPP3CCP48454 512 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 P2RX3P56373 397 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 YWHAZP63104 245 aaKnown RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 EFNB1P98172 346 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 PLEKHO1Q53GL0 409 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 INO80CQ6PI98 192 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 SLC22A25Q6T423 547 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 CHD1LQ86WJ1 897 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 C11orf65Q8NCR3 313 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 C7orf57Q8NEG2 295 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 CEP76Q8TAP6 659 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 GDPD5Q8WTR4 605 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 ATOH1Q92858 354 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 PAIP1Q9H074 479 aaKnown RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 FAM234AQ9H0X4 552 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 UNC45AQ9H3U1 944 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 SLC32A1Q9H598 525 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 SPATS2LQ9NUQ6 558 aaKnown RBP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 IL1RAPL1Q9NZN1 696 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 PEMTQ9UBM1 199 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 PCDHGB5Q9Y5G0 923 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 TNFRSF18Q9Y5U5 241 aa4.03□□□□□ -1.76
HMGB1P11-201ENST00000413899 H0YGN5 161 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 H3BNX3 289 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 TAF4O00268 1085 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 TSPAN4O14817 238 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 OAZ2O95190 189 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 F9P00740 461 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 COX7A2P14406 83 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PTPN2P17706 415 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PAX3P23760 479 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 ABCD3P28288 659 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 RFX2P48378 723 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 CDH12P55289 794 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 FAM27E3Q08E93 113 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 EDRF1Q3B7T1 1238 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 DCAF12L2Q5VW00 463 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 AWAT2Q6E213 333 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 TMEM81Q6P7N7 255 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PATL1Q86TB9 770 aaKnown RBP4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PLD5Q8N7P1 536 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PCYOX1LQ8NBM8 494 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC35F5Q8WV83 523 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 TMEM18Q96B42 140 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 RRP36Q96EU6 259 aaKnown RBP4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 TTYH1Q9H313 450 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 MVB12BQ9H7P6 319 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 CATSPERBQ9H7T0 1116 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 PREBQ9HCU5 417 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 KIAA1456Q9P272 454 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 ARHGAP26Q9UNA1 814 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 SQORQ9Y6N5 450 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 CECR2Q9BXF3 1484 aa4.02□□□□□ -1.77
HMGB1P11-201ENST00000413899 FNDC1Q4ZHG4 1894 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 A0A1W2PQM1 296 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 RPS10-NUDT3A0A1W2PQS6 291 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 MYMKA6NI61 221 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 CD8B2A6NJW9 211 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 MS4A18H0YCH9 400 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 J3KRW8 73 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 SPRY3O43610 288 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 LDB2O43679 373 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 SOX30O94993 753 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 BMP15O95972 392 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 CRYABP02511 175 aaKnown RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 LCATP04180 440 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 HEXAP06865 529 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 ZNF8P17098 575 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 ELF1P32519 619 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 DDIT3P35638 169 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 GGT5P36269 586 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms