RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SERPINB6P35237 376 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 EPHA5P54756 1037 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 YWHAGP61981 247 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 EIF4EBP2Q13542 120 aaPredicted RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 HP1BP3Q5SSJ5 553 aaPredicted RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ADGRD1Q6QNK2 874 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 C3orf62Q6ZUJ4 267 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 CAND1Q86VP6 1230 aaKnown RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 YAF2Q8IY57 180 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 SRRM1Q8IYB3 904 aaKnown RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 TAB3Q8N5C8 712 aaPredicted RBP17.45■□□□□ 0.38
PTPRC-206ENST00000413409 SHKBP1Q8TBC3 707 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 FBF1Q8TES7 1133 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 SGSM3Q96HU1 749 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 C8orf48Q96LL4 319 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 TMEM9BQ9NQ34 198 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 TMPRSS4Q9NRS4 437 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ABCC13Q9NSE7 274 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ARHGEF38Q9NXL2 777 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 NKIRAS1Q9NYS0 192 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 RSPH14Q9UHP6 348 aa17.45■□□□□ 0.38
PTPRC-206ENST00000413409 ATG2BQ96BY7 2078 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 PATE3B3GLJ2 98 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 I6L893 689 aaPredicted RBP17.44■□□□□ 0.38
PTPRC-206ENST00000413409 RNF103O00237 685 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 MTSS1O43312 755 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 METTL18O95568 372 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 APRTP07741 180 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ERCC2P18074 760 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 SSTR1P30872 391 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ARPP19P56211 112 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 TNK2Q07912 1038 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 COL28A1Q2UY09 1125 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 SLC39A12Q504Y0 691 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ANKRD20A2Q5SQ80 823 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ANKRD20A1Q5TYW2 823 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ANKRD20A3Q5VUR7 823 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 CAPN12Q6ZSI9 719 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF534Q76KX8 674 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 EDEM1Q92611 657 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 PAFAH2Q99487 392 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 NSRP1Q9H0G5 558 aaKnown RBP17.44■□□□□ 0.38
PTPRC-206ENST00000413409 RABEP2Q9H5N1 569 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 WDCPQ9H6R7 721 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ANLNQ9NQW6 1124 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 TBK1Q9UHD2 729 aa17.44■□□□□ 0.38
PTPRC-206ENST00000413409 ABCA7Q8IZY2 2146 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAM47DPA6NHR8 397 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAM72CH0Y354 149 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 GRIK1P39086 918 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF33AQ06730 810 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
PTPRC-206ENST00000413409 GALNT2Q10471 571 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 MRPL58Q14197 206 aaKnown RBP17.43■□□□□ 0.38
PTPRC-206ENST00000413409 STXBP5Q5T5C0 1151 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAXCQ5TGI0 409 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAM72AQ5TYM5 149 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAM72DQ6L9T8 149 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF280DQ6N043 979 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 MSANTD2Q6P1R3 559 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 FAM72BQ86X60 149 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 ARHGAP18Q8N392 663 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 P2RY11Q96G91 374 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF512Q96ME7 567 aaPredicted RBP17.43■□□□□ 0.38
PTPRC-206ENST00000413409 HAPLN3Q96S86 360 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 LGMNQ99538 433 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 OXCT2Q9BYC2 517 aaPredicted RBP17.43■□□□□ 0.38
PTPRC-206ENST00000413409 TKTL2Q9H0I9 626 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 SLC8A2Q9UPR5 921 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 SCML2Q9UQR0 700 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 TTLL3Q9Y4R7 772 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
PTPRC-206ENST00000413409 TCRBV9S1A1TA0A576 114 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 TRDMT1O14717 391 aaKnown RBP17.42■□□□□ 0.38
PTPRC-206ENST00000413409 CPP00450 1065 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 CREB1P16220 341 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 KRT15P19012 456 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 MSH2P43246 934 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 NRG1Q02297 640 aaPredicted RBP17.42■□□□□ 0.38
PTPRC-206ENST00000413409 WASHC5Q12768 1159 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 TWF1Q12792 350 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 PARP6Q2NL67 630 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 UAP1L1Q3KQV9 507 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 BTBD8Q5XKL5 378 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 DENND5BQ6ZUT9 1274 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 IGDCC3Q8IVU1 814 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 CNPY4Q8N129 248 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
PTPRC-206ENST00000413409 SCAMP5Q8TAC9 235 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 DCAKDQ8WVC6 231 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 DYDC1Q8WWB3 177 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 SLC44A1Q8WWI5 657 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 CKAP2Q8WWK9 683 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 SMC6Q96SB8 1091 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 LRRC3Q9BY71 257 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms