RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 MTRF1O75570 445 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 CNTFP26441 200 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 NIPAL4Q0D2K0 466 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 FOXD4Q12950 439 aaPredicted RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 BMPR2Q13873 1038 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 GRM2Q14416 872 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 KCTD11Q693B1 232 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 RWDD4Q6NW29 188 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 BPHLQ86WA6 291 aaPredicted RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 SLC7A5P1Q8MH63 180 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 DPF3Q92784 378 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 CELF6Q96J87 481 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 CCDC68Q9H2F9 335 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 TDRKHQ9Y2W6 561 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
LITAF-203ENST00000413364 MYO18AQ92614 2054 aaKnown RBP13.2□□□□□ -0.3
LITAF-203ENST00000413364 HMX2A2RU54 273 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 WDR91A4D1P6 747 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ENPP3O14638 875 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 MSI1O43347 362 aaKnown RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 NBNO60934 754 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 PSMG1O95456 288 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 MAGEA11P43364 429 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 OTOAQ7RTW8 1153 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 UNC5BQ8IZJ1 945 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 CEP70Q8NHQ1 597 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 STARD8Q92502 1023 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 CDKL2Q92772 493 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 DNAJC1Q96KC8 554 aaKnown RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 TEKT5Q96M29 485 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 TSGA13Q96PP4 275 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 LRRC37BQ96QE4 947 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 MLPHQ9BV36 600 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 MANSC1Q9H8J5 431 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 CASS4Q9NQ75 786 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 FAF1Q9UNN5 650 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 PCDHB5Q9Y5E4 795 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 NFKB1P19838 968 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 MGAT5Q09328 741 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 BFSP2Q13515 415 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 SPANXN3Q5MJ09 141 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ARTNQ5T4W7 220 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 MSANTD2Q6P1R3 559 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 OR52K1Q8NGK4 314 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 SLC7A6OSQ96CW6 309 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 FCRL2Q96LA5 508 aaPredicted RBP13.19□□□□□ -0.3
LITAF-203ENST00000413364 SERPINB11Q96P15 392 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 ADAM28Q9UKQ2 775 aa13.19□□□□□ -0.3
LITAF-203ENST00000413364 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 TBX10O75333 385 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 JCHAINP01591 159 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 POLBP06746 335 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 GRK4P32298 578 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 NRG1Q02297 640 aaPredicted RBP13.18□□□□□ -0.3
LITAF-203ENST00000413364 MRPL58Q14197 206 aaKnown RBP13.18□□□□□ -0.3
LITAF-203ENST00000413364 GPNMBQ14956 572 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 DDR2Q16832 855 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 MROH9Q5TGP6 573 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 CDHR3Q6ZTQ4 885 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 LZTR1Q8N653 840 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 HSPBAP1Q96EW2 488 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 CASD1Q96PB1 797 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 CATSPERBQ9H7T0 1116 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 SSX2IPQ9Y2D8 614 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 PLLPQ9Y342 182 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 CENPFP49454 3210 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms