RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TM6SF2Q9BZW4 377 aa8.64□□□□□ -1.03
SYNE1-211ENST00000413186 PHACTR1Q9C0D0 580 aa8.64□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF711Q9Y462 761 aa8.64□□□□□ -1.03
SYNE1-211ENST00000413186 SIPA1L1O43166 1804 aa8.64□□□□□ -1.03
SYNE1-211ENST00000413186 WDR91A4D1P6 747 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 MATN3O15232 486 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SRP72O76094 671 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TBX18O95935 607 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ITGB1P05556 798 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ESRRAP11474 423 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 DGKGP49619 791 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 CAPRIN2Q6IMN6 1127 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 POTEHQ6S545 545 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TMC3Q7Z5M5 1100 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 DENND6AQ8IWF6 608 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ARL10Q8N8L6 244 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 C12orf50Q8NA57 414 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SH3GL1Q99961 368 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 OMDQ99983 421 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SLC39A10Q9ULF5 831 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 USP15Q9Y4E8 981 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ILVBLA1L0T0 632 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 PRR23AA6NEV1 266 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 PDE9AO76083 593 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF7P17097 686 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 MGAT1P26572 445 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 PEX5P50542 639 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 AP1S1P61966 158 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ESRRGP62508 458 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 CHST9Q7L1S5 443 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 STK40Q8N2I9 435 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SH2D3CQ8N5H7 860 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 CCNYL1Q8N7R7 359 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 PCDH19Q8TAB3 1148 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF599Q96NL3 588 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SCOCQ9UIL1 159 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SMCHD1A6NHR9 2005 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 HGSO14964 777 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TPD52L2O43399 206 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 FAM189A1O60320 539 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 LATS1O95835 1130 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 NUMBP49757 651 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 DMC1Q14565 340 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 HIBCHQ6NVY1 386 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TBC1D19Q8N5T2 526 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 NAT16Q8N8M0 369 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 C3orf58Q8NDZ4 430 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SERPINI1Q99574 410 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 GINS4Q9BRT9 223 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 IARS2Q9NSE4 1012 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 MCM3APO60318 1980 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TRIM49D1C9J1S8 452 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 CHUKO15111 745 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 RHOP08100 348 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 MLNP12872 115 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SP100P23497 879 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ADRA1DP25100 572 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 HOXC8P31273 242 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 GP5P40197 560 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SERPINB8P50452 374 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 AGAP9Q5VTM2 703 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 ANKS1BQ7Z6G8 1248 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 SCML4Q8N228 414 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 PSMG2Q969U7 264 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TRMT61BQ9BVS5 477 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 MRPL40Q9NQ50 206 aaKnown RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 GKN1Q9NS71 199 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.63□□□□□ -1.03
SYNE1-211ENST00000413186 TRIM33Q9UPN9 1127 aa8.63□□□□□ -1.03
SYNE1-211ENST00000413186 E2F8A0AVK6 867 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TGM5O43548 720 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 KRT6AP02538 564 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 PRNPP04156 253 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 KRT6BP04259 564 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ZSCAN5DPP0CG00 497 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 CD151P48509 253 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 KRT6CP48668 564 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 WNT3AP56704 352 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ITIH4Q14624 930 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TEAD2Q15562 447 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TRADDQ15628 312 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 AAK1Q2M2I8 961 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TMEM240Q5SV17 173 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 THEMIS2Q5TEJ8 643 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUPD1Q68J44 220 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 FBXL22Q6P050 247 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TTC7BQ86TV6 843 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 RTN4RL1Q86UN2 441 aaPredicted RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 PYROXD2Q8N2H3 581 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 WDTC1Q8N5D0 677 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 MRPL43Q8N983 215 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 HDAC7Q8WUI4 952 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 C1orf74Q96LT6 269 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 WWP1Q9H0M0 922 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms