RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 FBXL12Q9NXK8 326 aa14.16□□□□□ -0.14
CPNE1-206ENST00000412056 WSB2Q9NYS7 404 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-206ENST00000412056 SCML1Q9UN30 329 aa14.16□□□□□ -0.14
CPNE1-206ENST00000412056 TP53BP1Q12888 1972 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-206ENST00000412056 TRPM6Q9BX84 2022 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 PROB1E7EW31 1015 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 KPNA3O00505 521 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 KRIT1O00522 736 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 MAP3K13O43283 966 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 GJB3O75712 270 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 RNASEH2AO75792 299 aaKnown RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 POP4O95707 220 aaKnown RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 CCNCP24863 283 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 ACSL1P33121 698 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 PTPN7P35236 360 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 MMP13P45452 471 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 RPL6Q02878 288 aaKnown RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 PPIDQ08752 370 aaKnown RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 ZNF235Q14590 738 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 MYLK3Q32MK0 819 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 MEI1Q5TIA1 1274 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 TIGD7Q6NT04 549 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 SLC36A4Q6YBV0 504 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 B4GALNT4Q76KP1 1039 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 CCDC13Q8IYE1 715 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 PGBD5Q8N414 524 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 HDDC3Q8N4P3 179 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 TMIEQ8NEW7 156 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 TRIM58Q8NG06 486 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 NSMCE1Q8WV22 266 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 NKD2Q969F2 451 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 ZC3H10Q96K80 434 aaKnown RBP14.15□□□□□ -0.14
CPNE1-206ENST00000412056 TSGA13Q96PP4 275 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 NEUROG2Q9H2A3 272 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 SEPT3Q9UH03 358 aa14.15□□□□□ -0.14
CPNE1-206ENST00000412056 USP27XA6NNY8 438 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 MATN3O15232 486 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 ZSCAN12O43309 604 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 NDUFS2O75306 463 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 PIGNO95427 931 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 LMNAP02545 664 aaKnown RBP14.14□□□□□ -0.15
CPNE1-206ENST00000412056 UGT2B4P06133 528 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 OXTRP30559 389 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 MAXP61244 160 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 CNTN1Q12860 1018 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 PDK1Q15118 436 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 ELF2Q15723 593 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 FAM182AQ5T1J6 154 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 MARC1Q5VT66 337 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-206ENST00000412056 ARMCX6Q7L4S7 300 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 LPCAT2Q7L5N7 544 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 SRLQ86TD4 932 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 C11orf74Q86VG3 221 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 MAML1Q92585 1016 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 P3H4Q92791 437 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 PSKH2Q96QS6 385 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 MGME1Q9BQP7 344 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 GPR174Q9BXC1 333 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 NT5MQ9NPB1 228 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 RAB23Q9ULC3 237 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 NCKAP1Q9Y2A7 1128 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 EFR3BQ9Y2G0 817 aa14.14□□□□□ -0.15
CPNE1-206ENST00000412056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.14□□□□□ -0.152e-10■□□□□ 8.4
CPNE1-206ENST00000412056 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 APOC4-APOC2K7ER74 178 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 KCNK1O00180 336 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 PPP1R12AO14974 1030 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 RHOBTB1O94844 696 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 APOC2P02655 101 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 CCNB1P14635 433 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 ITGB7P26010 798 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 CETN2P41208 172 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 CSNK1DP48730 415 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 NR2C2P49116 596 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 DHPSP49366 369 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 RENBPP51606 427 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 RAD51Q06609 339 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 AP1B1Q10567 949 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 ZBTB17Q13105 803 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 HNRNPDQ14103 355 aaKnown RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 NOMO1Q15155 1222 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 RPS6KA1Q15418 735 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 PIP5KL1Q5T9C9 394 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 AGBL4Q5VU57 503 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
CPNE1-206ENST00000412056 SLC41A1Q8IVJ1 513 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 TEX26Q8N6G2 289 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 FATE1Q969F0 183 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 FAM131CQ96AQ9 280 aa14.13□□□□□ -0.15
CPNE1-206ENST00000412056 PPP1R16AQ96I34 528 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms