RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 PKN3Q6P5Z2 889 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 PGBD5Q8N414 524 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 CELF5Q8N6W0 485 aaKnown RBP11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 PPHLN1Q8NEY8 458 aaKnown RBP11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 VN1R2Q8NFZ6 395 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 PEX13Q92968 403 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 ZBTB9Q96C00 473 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 CERS2Q96G23 380 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 NUDCD1Q96RS6 583 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 SEMA3CQ99985 751 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 CAPS2Q9BXY5 557 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 SLC2A11Q9BYW1 496 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 NSMCE4AQ9NXX6 385 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 OBP2AQ9NY56 170 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 UBP1Q9NZI7 540 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 VPS28Q9UK41 221 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 SMG5Q9UPR3 1016 aaKnown RBP11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 RPS6KL1Q9Y6S9 549 aa11.8□□□□□ -0.52
CLUHP3-202ENST00000411844 ZCWPW2A0A1B0GU75 182 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 HEATR9A2RTY3 570 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CBX4O00257 560 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 INSIG1O15503 277 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 PRPF4O43172 522 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 ALADP13716 330 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CEBPBP17676 345 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 KRT15P19012 456 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 PAMP19021 973 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CA4P22748 312 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CSKP41240 450 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CSNK1DP48730 415 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 GYS2P54840 703 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 ARF5P84085 180 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CDK18Q07002 472 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CYTH1Q15438 398 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 FSCBQ5H9T9 825 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CERCAMQ5T4B2 595 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 PDPK2PQ6A1A2 396 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CYP4X1Q8N118 509 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 GABPB2Q8TAK5 448 aaPredicted RBP11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 MZB1Q8WU39 189 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 IRF7Q92985 503 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 LMLNQ96KR4 655 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 TRPV4Q9HBA0 871 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 GDE1Q9NZC3 331 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CTNNAL1Q9UBT7 734 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 TBK1Q9UHD2 729 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 VPS51Q9UID3 782 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 RIMKLBQ9ULI2 386 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CCL26Q9Y258 94 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 TCAF1Q9Y4C2 921 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
CLUHP3-202ENST00000411844 HELZP42694 1942 aaKnown RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 MUSKO15146 869 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 ATP9BO43861 1147 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TMCC1O94876 653 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 NDST3O95803 873 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 BRAFP15056 766 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 MZF1P28698 734 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 GBP2P32456 591 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 MAXP61244 160 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 AP1S1P61966 158 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 NTHL1P78549 312 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 CRADDP78560 199 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SULT2A1Q06520 285 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 EFTUD2Q15029 972 aaKnown RBP eCLIP11.78□□□□□ -0.523e-8■■■■■ 42.7
CLUHP3-202ENST00000411844 PLEKHG6Q3KR16 790 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 KIAA0930Q6ICG6 404 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TRMT10BQ6PF06 316 aaKnown RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TIFABQ6ZNK6 161 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 ARID3BQ8IVW6 561 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 CTAGE3PQ8IX95 158 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TDHQ8IZJ6 230 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 EFHBQ8N7U6 833 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 PPM1NQ8N819 430 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 GDPD5Q8WTR4 605 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 E2F7Q96AV8 911 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 ISG20Q96AZ6 181 aaKnown RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 ZNF669Q96BR6 464 aaPredicted RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 IFT43Q96FT9 208 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SGSM3Q96HU1 749 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SMC6Q96SB8 1091 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 CPNE1Q99829 537 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 APOL2Q9BQE5 337 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 TRABDQ9H4I3 376 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 CERS4Q9HA82 394 aa11.78□□□□□ -0.52
CLUHP3-202ENST00000411844 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms