RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 EXOGQ9Y2C4 368 aaKnown RBP0.95□□□□□ -2.26
RNU4-61P-201ENST00000411243 C2CD2Q9Y426 696 aa0.95□□□□□ -2.26
RNU4-61P-201ENST00000411243 J3KR12 359 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 ARP10275 920 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 CAPN2P17655 700 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 GSTM5P46439 218 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 PGFP49763 221 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 POU5F1Q01860 360 aaKnown RBP0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 PLK5Q496M5 336 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 TRIM65Q6PJ69 517 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 CCDC129Q6ZRS4 1044 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 PIK3AP1Q6ZUJ8 805 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 KRT28Q7Z3Y7 464 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 DDHD1Q8NEL9 900 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZNF354BQ96LW1 612 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 RAB11FIP5Q9BXF6 653 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZMAT3Q9HA38 289 aaKnown RBP0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 PLEKHA5Q9HAU0 1116 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 PRDM8Q9NQV8 689 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 POMT2Q9UKY4 750 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 LOXL2Q9Y4K0 774 aa0.94□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZFAND5O76080 213 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 TFRCP02786 760 aaKnown RBP0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 GYS1P13807 737 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 PRPH2P23942 346 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 WDR93Q6P2C0 686 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 CCDC185Q8N715 623 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 PPHLN1Q8NEY8 458 aaKnown RBP0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 NMD3Q96D46 503 aaKnown RBP0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 SUCLG2Q96I99 432 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 PIGQQ9BRB3 760 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 MMTAG2Q9BU76 263 aaKnown RBP0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 SLC13A1Q9BZW2 595 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 CHST8Q9H2A9 424 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 CNTN6Q9UQ52 1028 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 PSAT1Q9Y617 370 aa0.93□□□□□ -2.26
RNU4-61P-201ENST00000411243 UBA1P22314 1058 aaKnown RBP0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 HOXA1P49639 335 aaPredicted RBP0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 CYP2J2P51589 502 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 KRTAP12-4P60329 112 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 GPS1Q13098 491 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 PDSS1Q5T2R2 415 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 SERPINA11Q86U17 422 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 ATP11CQ8NB49 1132 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 OR2T6Q8NHC8 308 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 BBS10Q8TAM1 723 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 REXO5Q96IC2 774 aaKnown RBP0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 LRFN5Q96NI6 719 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 EIF3CQ99613 913 aaKnown RBP0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 NPFFR1Q9GZQ6 430 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 LHPPQ9H008 270 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 NOX4Q9NPH5 578 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 TRHDEQ9UKU6 1024 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZNF256Q9Y2P7 627 aaPredicted RBP0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 PAM16Q9Y3D7 125 aa0.92□□□□□ -2.26
RNU4-61P-201ENST00000411243 RNMTO43148 476 aaKnown RBP0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZNF32P17041 273 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 DCTDP32321 178 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 DPP6P42658 865 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 WDR38Q5JTN6 314 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 KCTD8Q6ZWB6 473 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 NECAB2Q7Z6G3 386 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZNF614Q8N883 585 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 ATL2Q8NHH9 583 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 TRIB2Q92519 343 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 ST6GAL2Q96JF0 529 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 KCNK9Q9NPC2 374 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 SLC5A4Q9NY91 659 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 EPHA6Q9UF33 1036 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 CDH22Q9UJ99 828 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 SLC6A5Q9Y345 797 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 UBE2J1Q9Y385 318 aaPredicted RBP0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 PYGO1Q9Y3Y4 419 aa0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 MRPL42Q9Y6G3 142 aaKnown RBP0.91□□□□□ -2.26
RNU4-61P-201ENST00000411243 ZSCAN9O15535 394 aaPredicted RBP0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 FOXH1O75593 365 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 RFPL2O75678 378 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 ALDOAP04075 364 aaKnown RBP0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM27P14373 513 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 MGMTP16455 207 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 AKAP5P24588 427 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 PRKCHP24723 683 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 SLC7A1P30825 629 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 RFC1P35251 1148 aaPredicted RBP0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 CLCNKBP51801 687 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 RAPSNQ13702 412 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 CCDC144BQ3MJ40 725 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 ATP13A5Q4VNC0 1218 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 TMEM88Q6PEY1 159 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 GFRALQ6UXV0 394 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 IL31RAQ8NI17 732 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 CHRDL1Q9BU40 450 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 FGFBP2Q9BYJ0 223 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM6Q9C030 488 aaPredicted RBP0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 SACM1LQ9NTJ5 587 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 MOB4Q9Y3A3 225 aa0.9□□□□□ -2.27
RNU4-61P-201ENST00000411243 DISP3Q9P2K9 1392 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 A0A0G2JLW4 131 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 TCRBV7S3A2A0A539 114 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms