RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 OMDQ99983 421 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 ZDHHC6Q9H6R6 413 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 EVLQ9UI08 416 aaPredicted RBP22.7■■□□□ 1.22
PTCD3-203ENST00000409783 AMFRQ9UKV5 643 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 PPP2R2CQ9Y2T4 447 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 WDR87Q6ZQQ6 2873 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 ANKRD36A6QL64 1941 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 BCLAF3A2AJT9 711 aaKnown RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 KPNA3O00505 521 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 APOL1O14791 398 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 INSIG1O15503 277 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 NRDCO43847 1150 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 FTCDO95954 541 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 IGSF6O95976 241 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 TGM1P22735 817 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 DHPSP49366 369 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 ZNF33AQ06730 810 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 LLGL1Q15334 1064 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 ODF2Q5BJF6 829 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 TFDP3Q5H9I0 405 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 PIP5KL1Q5T9C9 394 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 NPNTQ6UXI9 565 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 ARMCX6Q7L4S7 300 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 PEX26Q7Z412 305 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 CADM4Q8NFZ8 388 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 GANCQ8TET4 914 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 ANP32BQ92688 251 aaKnown RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 FATE1Q969F0 183 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 RBM41Q96IZ5 413 aaKnown RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 OLFM3Q96PB7 478 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 HERPUD2Q9BSE4 406 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 MAK16Q9BXY0 300 aaKnown RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 C6orf106Q9H6K1 298 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 GMEB2Q9UKD1 530 aa22.69■■□□□ 1.22
PTCD3-203ENST00000409783 PACSIN2Q9UNF0 486 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-203ENST00000409783 KRIT1O00522 736 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 DDX3YO15523 660 aaKnown RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 SEMA4FO95754 770 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 ZFXP17010 805 aaPredicted RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 CSNK1DP48730 415 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 ADPRHP54922 357 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 PPP2R5EQ16537 467 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 ALYREFQ86V81 257 aaKnown RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 PGBD5Q8N414 524 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 RYBPQ8N488 228 aaPredicted RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 TEX26Q8N6G2 289 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 LRRN4Q8WUT4 740 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 MAML1Q92585 1016 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 HDAC11Q96DB2 347 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 NSMCE3Q96MG7 304 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 HSPA12BQ96MM6 686 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 ZNF830Q96NB3 372 aaPredicted RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 CPEB1Q9BZB8 566 aaKnown RBP22.68■■□□□ 1.22
PTCD3-203ENST00000409783 PCED1AQ9H1Q7 454 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 ARRDC1-AS1Q9H2J1 176 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 NCDNQ9UBB6 729 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 SEPT3Q9UH03 358 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 PCDHGA5Q9Y5G8 931 aa22.68■■□□□ 1.22
PTCD3-203ENST00000409783 METTL12A8MUP2 240 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 SLC7A4O43246 635 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 CST8O60676 142 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 CR2P20023 1033 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 MX2P20592 715 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 CCNCP24863 283 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 ITGB7P26010 798 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 RWDD2BP57060 319 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 TAS2R38P59533 333 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 COPS2P61201 443 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 NSUN2Q08J23 767 aaKnown RBP eCLIP22.67■■□□□ 1.22
PTCD3-203ENST00000409783 TFDP2Q14188 446 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 PLA2G2CQ5R387 149 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 LYSMD4Q5XG99 296 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 HES6Q96HZ4 224 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 CINPQ9BW66 212 aaPredicted RBP22.67■■□□□ 1.22
PTCD3-203ENST00000409783 HDAC8Q9BY41 377 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 PARD6AQ9NPB6 346 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 LZTFL1Q9NQ48 299 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 HEY1Q9Y5J3 304 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 GVINP1Q7Z2Y8 2422 aa22.67■■□□□ 1.22
PTCD3-203ENST00000409783 ZNF292O60281 2723 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PI4KAP42356 2102 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 DOCK9Q9BZ29 2069 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 MIF4GDA9UHW6 222 aaKnown RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 MATN3O15232 486 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PLRG1O43660 514 aaKnown RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 GJB3O75712 270 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 UGT2B4P06133 528 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PYGMP11217 842 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 ITPKAP23677 461 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PTPN7P35236 360 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 DYNLT1P63172 113 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 CREB5Q02930 508 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PPIDQ08752 370 aaKnown RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 HNRNPDQ14103 355 aaKnown RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PEAR1Q5VY43 1037 aaPredicted RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 KAZNQ674X7 775 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 AADACL2Q6P093 401 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 NCEH1Q6PIU2 408 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms