RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PCDHB1Q9Y5F3 818 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 AGPSO00116 658 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TRIM38O00635 465 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 YKT6O15498 198 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 IRAK2O43187 625 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 LATO43561 262 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 SIGLEC6O43699 453 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 CEP104O60308 925 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 RTN2O75298 545 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 GLI1P08151 1106 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 VDRP11473 427 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 ACP1P24666 158 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 MAT2AP31153 395 aaKnown RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 DNA2P51530 1060 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 GYS2P54840 703 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 CFHR1Q03591 330 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 CUL2Q13617 745 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 NUGGCQ68CJ6 796 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 KDM7AQ6ZMT4 941 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 DAAM2Q86T65 1068 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 ARHGEF19Q8IW93 802 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 DCBLD1Q8N8Z6 715 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 AZIN2Q96A70 460 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 SH3GL2Q99962 352 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 UBE2TQ9NPD8 197 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 CLCA2Q9UQC9 943 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 COQ4Q9Y3A0 265 aa13.02□□□□□ -0.33
CHRNA1-205ENST00000409542 EDDM13A0A1B0GTR0 161 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 RAD51CO43502 376 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 OPA1O60313 960 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 BUB1BO60566 1050 aaPredicted RBP13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 MT-CO3P00414 261 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 LTFP02788 710 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 C5AR1P21730 350 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 GGCXP38435 758 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 LMAN1P49257 510 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 ECT2LQ008S8 904 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 GUCY2DQ02846 1103 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 ILKQ13418 452 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 NAPEPLDQ6IQ20 393 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 LCLAT1Q6UWP7 414 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 DNAAF5Q86Y56 855 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 SLC25A45Q8N413 288 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 MFSD2AQ8NA29 543 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 KDM1BQ8NB78 822 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 SLC39A13Q96H72 371 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 ISCUQ9H1K1 167 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 FAM204AQ9H8W3 233 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 CPNE5Q9HCH3 593 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 EPB41L5Q9HCM4 733 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 UCKL1Q9NWZ5 548 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 CYTH4Q9UIA0 394 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 NAALADL1Q9UQQ1 740 aa13.01□□□□□ -0.33
CHRNA1-205ENST00000409542 TMCO5BA8MYB1 307 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 CAPN9O14815 690 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 DDX3YO15523 660 aaKnown RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 HSF2BPO75031 334 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 MOCS2O96007 188 aaPredicted RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 IL1BP01584 269 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 SETSIPP0DME0 302 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 MYF5P13349 255 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 ACTN2P35609 894 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 CARSP49589 748 aaKnown RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 MRPS25P82663 173 aaKnown RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 CUL1Q13616 776 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 CDH18Q13634 790 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 POM121L1PQ3SYA9 428 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 LGI2Q8N0V4 545 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 IRGQQ8WZA9 623 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms