RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 JMJD7P0C870 316 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 TSHRP16473 764 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 L1CAMP32004 1257 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 DNA2P51530 1060 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 PFN3P60673 137 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 CCL7P80098 99 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 UBAP2LQ14157 1087 aaKnown RBP16.99■□□□□ 0.31
CHMP3-203ENST00000409225 FAXCQ5TGI0 409 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 PARS2Q7L3T8 475 aaKnown RBP16.99■□□□□ 0.31
CHMP3-203ENST00000409225 DCAF4L2Q8NA75 395 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 ZSCAN1Q8NBB4 408 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 KYQ8NBH2 561 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 SLC2A13Q96QE2 648 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
CHMP3-203ENST00000409225 SEPT10Q9P0V9 454 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 GGT7Q9UJ14 662 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 TMX2-CTNND1H3BSU7 103 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 NEMP1O14524 444 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 AP1G1O43747 822 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 ZNF821O75541 412 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-203ENST00000409225 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
CHMP3-203ENST00000409225 CELA2BP08218 269 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-203ENST00000409225 GP1BBP13224 206 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 PDCLQ13371 301 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 PTK2BQ14289 1009 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 CLCA4Q14CN2 919 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 TCEA2Q15560 299 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 C5orf22Q49AR2 442 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 ZFAND4Q86XD8 727 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 SDR16C5Q8N3Y7 309 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 OR7D4Q8NG98 312 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 LMO3Q8TAP4 145 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 HEPHQ9BQS7 1158 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 CPEB1Q9BZB8 566 aaKnown RBP16.98■□□□□ 0.31
CHMP3-203ENST00000409225 SLC25A18Q9H1K4 315 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 DOLKQ9UPQ8 538 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 ITM2BQ9Y287 266 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 LOXL2Q9Y4K0 774 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 SNX10Q9Y5X0 201 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 FLNCQ14315 2725 aa16.98■□□□□ 0.31
CHMP3-203ENST00000409225 NVLO15381 856 aaKnown RBP16.97■□□□□ 0.31
CHMP3-203ENST00000409225 THAP12O43422 761 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 MED7O43513 233 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 WT1P19544 449 aaPredicted RBP16.97■□□□□ 0.31
CHMP3-203ENST00000409225 ITIH1P19827 911 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 NOS2P35228 1153 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 ABL2P42684 1182 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 GCNT1Q02742 428 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 MTA1Q13330 715 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 TFAP2DQ7Z6R9 452 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 PTRH1Q86Y79 214 aaKnown RBP16.97■□□□□ 0.31
CHMP3-203ENST00000409225 ARL10Q8N8L6 244 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 DENND6BQ8NEG7 585 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 TBATAQ96M53 351 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 SPON2Q9BUD6 331 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 GOLPH3LQ9H4A5 285 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 ZDHHC6Q9H6R6 413 aa16.97■□□□□ 0.31
CHMP3-203ENST00000409225 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 A0A1W2PQM1 296 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 PMM2O15305 246 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 TSPAN6O43657 245 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 PRAMEF10O60809 474 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 HSF2BPO75031 334 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 GLI1P08151 1106 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 IGFALSP35858 605 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 CCNHP51946 323 aaPredicted RBP16.96■□□□□ 0.31
CHMP3-203ENST00000409225 CETN1Q12798 172 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 PNOCQ13519 176 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 MEA1Q16626 185 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 CARD16Q5EG05 197 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 EFHC1Q5JVL4 640 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 SETD3Q86TU7 594 aaPredicted RBP16.96■□□□□ 0.31
CHMP3-203ENST00000409225 PCDH19Q8TAB3 1148 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 ZNF606Q8WXB4 792 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 TMEM74Q96NL1 305 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 FUCA2Q9BTY2 467 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 ACP6Q9NPH0 428 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 ASNSD1Q9NWL6 643 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 GEMIN8Q9NWZ8 242 aaKnown RBP16.96■□□□□ 0.31
CHMP3-203ENST00000409225 MPP6Q9NZW5 540 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 FOXJ2Q9P0K8 574 aa16.96■□□□□ 0.31
CHMP3-203ENST00000409225 FCF1Q9Y324 198 aaKnown RBP16.96■□□□□ 0.31
CHMP3-203ENST00000409225 NBPF19A0A087WUL8 3843 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 M0QYT0 321 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 ZNF202O95125 648 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
CHMP3-203ENST00000409225 GNA15P30679 374 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 GKP32189 559 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 CCKBRP32239 447 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 SERPINH1P50454 418 aaKnown RBP16.95■□□□□ 0.3
CHMP3-203ENST00000409225 PPARDQ03181 441 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 SKIDA1Q1XH10 827 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms