RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 PIK3R3Q92569 461 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 SLC9A6Q92581 669 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 KCNN2Q9H2S1 579 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 SAMD4AQ9UPU9 718 aaKnown RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 TRIM38O00635 465 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CYB561D2O14569 222 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ACSL4O60488 711 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 JCHAINP01591 159 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ICAM1P05362 532 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 GCNT1Q02742 428 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ZNF248Q8NDW4 579 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 PIH1D2Q8WWB5 315 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CCDC177Q9NQR7 707 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 EMC3Q9P0I2 261 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ARMCX1Q9P291 453 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 ALKQ9UM73 1620 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 PRMT5O14744 637 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CYP2C18P33260 490 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 CARNMT1Q8N4J0 409 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 THP07101 528 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 RGS1Q08116 209 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 RETSATQ6NUM9 610 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 POU5F2Q8N7G0 328 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 HPS1Q92902 700 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 TMCO6Q96DC7 493 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 C12orf66Q96MD2 445 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 TBCDQ9BTW9 1192 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 INTS7Q9NVH2 962 aaKnown RBP12.27□□□□□ -0.45
SHANK2-203ENST00000409161 RBM22Q9NW64 420 aaKnown RBP eCLIP12.27□□□□□ -0.458e-6■□□□□ 10.3
SHANK2-203ENST00000409161 ABCC3O15438 1527 aa12.27□□□□□ -0.45
SHANK2-203ENST00000409161 BTN3A1O00481 513 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ITGAVP06756 1048 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 CRATP43155 626 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ATPIF1Q9UII2 106 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 FAM25EA8MYX2 175 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 CBX6O95503 412 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 FOLH1Q04609 750 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 DDR1Q08345 913 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 LIPMQ5VYY2 423 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ITCHQ96J02 903 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 RTKNQ9BST9 563 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 OSGEPL1Q9H4B0 414 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 PCDHGA10Q9Y5H3 936 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 URADA6NGE7 173 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 CCNKO75909 580 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 B3GAT3O94766 335 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 IGSF6O95976 241 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 IFNA6P05013 189 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 CKMP06732 381 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SLC6A2P23975 617 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 PEX6Q13608 980 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 MCOLN2Q8IZK6 566 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 C18orf25Q96B23 403 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 AIFM2Q9BRQ8 373 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 CKBP12277 381 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 COX4I1P13073 169 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 RPL21P46778 160 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 RAB27AP51159 221 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 TNNI3P19429 210 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 HLFQ16534 295 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 DNAJC1Q96KC8 554 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 GPC6Q9Y625 555 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 FAM240BA0A1B0GVZ2 78 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 LTA4HP09960 611 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 MBL2P11226 248 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 GPD2P43304 727 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ANXA8L1Q5VT79 327 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ZNF668Q96K58 619 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 TPP1O14773 563 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 RNF180Q86T96 592 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 RXFP2Q8WXD0 754 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 HOPXQ9BPY8 73 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 ARL15Q9NXU5 204 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 PRKG2Q13237 762 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 PERM1Q5SV97 790 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 TATDN2Q93075 761 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 TRPV5Q9NQA5 729 aa12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SAMHD1Q9Y3Z3 626 aaKnown RBP12.26□□□□□ -0.45
SHANK2-203ENST00000409161 SLC28A1O00337 649 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 CST1P01037 141 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 FGFR2P21802 821 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 CCR4P51679 360 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 PTPRNQ16849 979 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 TRMT11Q7Z4G4 463 aaKnown RBP12.25□□□□□ -0.45
SHANK2-203ENST00000409161 RFKQ969G6 155 aa12.25□□□□□ -0.45
SHANK2-203ENST00000409161 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms