RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 LAYNQ6UX15 382 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CLEC17AQ6ZS10 378 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 FAM43BQ6ZT52 329 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 PAGE2Q7Z2X7 111 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CLEC4FQ8N1N0 589 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 PCED1BQ96HM7 432 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SPATA13Q96N96 652 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 IL22Q9GZX6 179 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MRTO4Q9UKD2 239 aaKnown RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CA14Q9ULX7 337 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 A0A1B0GVM2 712 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 TCAF2A6NFQ2 919 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 LRRC14BA6NHZ5 514 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SNTNA6NMZ2 147 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MYO1CO00159 1063 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CILPO75339 1184 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 VPS4BO75351 444 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 TNFP01375 233 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 GOT1P17174 413 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CDH3P22223 829 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MC4RP32245 332 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 LSP1P33241 339 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 HTR7P34969 479 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 IRGCQ6NXR0 463 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 NPNTQ6UXI9 565 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 PHF13Q86YI8 300 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 AHI1Q8N157 1196 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 COL26A1Q96A83 441 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 PAFAH2Q99487 392 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 FAM124BQ9H5Z6 455 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 NRDE2Q9H7Z3 1164 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 ETNK2Q9NVF9 386 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 WARS2Q9UGM6 360 aaKnown RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CHD2O14647 1828 aaKnown RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 A0A087X0B3 334 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 GLYATL1P3A0A0U1RQE8 302 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 A0A0U1RQF3 1178 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SLC31A1O15431 190 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 TM7SF2O76062 418 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 FGF1P05230 155 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 GSNP06396 782 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 RHOQP17081 205 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SLC11A1P49279 550 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CCR3P51677 355 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 COPZ1P61923 177 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 LPIN1Q14693 890 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 ALKBH2Q6NS38 261 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MFSD7Q6UXD7 560 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 DNAAF5Q86Y56 855 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 MCEMP1Q8IX19 187 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF248Q8NDW4 579 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 FUBP3Q96I24 572 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 FAM111AQ96PZ2 611 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF670Q9BS34 389 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 RSPH9Q9H1X1 276 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-203ENST00000409101 DPEP3Q9H4B8 488 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 POLR1BQ9H9Y6 1135 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SYBUQ9NX95 663 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 NCKIPSDQ9NZQ3 722 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 STOML1Q9UBI4 398 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 KLQ9UEF7 1012 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 SNX6Q9UNH7 406 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 HCN4Q9Y3Q4 1203 aa5.07□□□□□ -1.6
SCN3A-203ENST00000409101 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 TM9SF1O15321 606 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 CYP1A2P05177 515 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 PABPC1P11940 636 aaKnown RBP5.06□□□□□ -1.6
SCN3A-203ENST00000409101 GP5P40197 560 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 MAPKAPK2P49137 400 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 MAXP61244 160 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 NFYCQ13952 458 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 TAF13Q15543 124 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 E2F4Q16254 413 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 CCDC153Q494R4 210 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 COLEC12Q5KU26 742 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 AGBL2Q5U5Z8 902 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 CES3Q6UWW8 571 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 LRP10Q7Z4F1 713 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 LUZP2Q86TE4 346 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 RASGRP3Q8IV61 690 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 RBFAQ8N0V3 343 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SUN3Q8TAQ9 357 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 ACTRT1Q8TDG2 376 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SLC22A17Q8WUG5 538 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SIPA1Q96FS4 1042 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 COPS8Q99627 209 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 HNRNPABQ99729 332 aaKnown RBP5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 HGH1Q9BTY7 390 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 PABPC3Q9H361 631 aaKnown RBP5.06□□□□□ -1.6
SCN3A-203ENST00000409101 CD207Q9UJ71 328 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 STXBP5LQ9Y2K9 1186 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SLCO1B7G3V0H7 640 aa5.06□□□□□ -1.6
SCN3A-203ENST00000409101 BUD23O43709 281 aaKnown RBP5.06□□□□□ -1.6
SCN3A-203ENST00000409101 SNAI1O95863 264 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms