RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 TMC7Q7Z402 723 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 TRIM42Q8IWZ5 723 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 ARMC2Q8NEN0 867 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 BADQ92934 168 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 SEMA3CQ99985 751 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 ZMYND15Q9H091 742 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 DCDC2Q9UHG0 476 aa19.2■□□□□ 0.66
USP39-202ENST00000409025 HEATR9A2RTY3 570 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 TIMM44O43615 452 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 GLRA3O75311 464 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 ADH1AP07327 375 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 HDCP19113 662 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 SERPINB8P50452 374 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 PDE1CQ14123 709 aaPredicted RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 STXBP5Q5T5C0 1151 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 ESRP1Q6NXG1 681 aaKnown RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 KYAT3Q6YP21 454 aaKnown RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 DCLK2Q8N568 766 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 ARL14EPQ8N8R7 260 aaPredicted RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 CCDC63Q8NA47 563 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 OR52K2Q8NGK3 314 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 ZFRQ96KR1 1074 aaKnown RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 RANBP9Q96S59 729 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 KLHL14Q9P2G3 628 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 UBA2Q9UBT2 640 aaPredicted RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 MYLKQ15746 1914 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 TTC24A2A3L6 582 aaPredicted RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 OLFM2O95897 454 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 GABRR2P28476 465 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 TXNDC8Q6A555 127 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 FSTL4Q6MZW2 842 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 CCT6BQ92526 530 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 MRPS31Q92665 395 aaKnown RBP19.19■□□□□ 0.66
USP39-202ENST00000409025 ISL2Q96A47 359 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 SLC22A12Q96S37 553 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 KDM4CQ9H3R0 1056 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 SEPT3Q9UH03 358 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 TBC1D30Q9Y2I9 924 aa19.19■□□□□ 0.66
USP39-202ENST00000409025 OBSL1O75147 1896 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 GOLGA8TH3BQL2 631 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 VAPBO95292 243 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 NUMBP49757 651 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 LILRA6Q6PI73 481 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 OTOAQ7RTW8 1153 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 TRPM8Q7Z2W7 1104 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 PTPRN2Q92932 1015 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 ATXN7L3BQ96GX2 97 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 SNX15Q9NRS6 342 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 TREX1Q9NSU2 369 aa19.18■□□□□ 0.66
USP39-202ENST00000409025 CXXC1Q9P0U4 656 aaPredicted RBP19.18■□□□□ 0.66
USP39-202ENST00000409025 LOC285095A0A1B0GVY8 99 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MUSKO15146 869 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 BGNP21810 368 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 HADHAP40939 763 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MAGEA12P43365 314 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 IHHQ14623 411 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 RFTN1Q14699 578 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 UGP2Q16851 508 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 INSCQ1MX18 579 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 FYB2Q5VWT5 728 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 KIAA0930Q6ICG6 404 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 CNTN4Q8IWV2 1026 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 ELMOD1Q8N336 334 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 IFT43Q96FT9 208 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 RAD9AQ99638 391 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MCMBPQ9BTE3 642 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 CINPQ9BW66 212 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 EMILIN2Q9BXX0 1053 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MTO1Q9Y2Z2 717 aaKnown RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 CPQQ9Y646 472 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 TYW5A2RUC4 315 aaKnown RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 KLF11O14901 512 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 BIRC5O15392 142 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 C8AP07357 584 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 ARCN1P48444 511 aaKnown RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 THOC5Q13769 683 aaKnown RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 CNGA3Q16281 694 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 SIRPB2Q5JXA9 342 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 TMEM240Q5SV17 173 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 RNF219Q5W0B1 726 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 ALG1LQ6GMV1 187 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 PSRC1Q6PGN9 363 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 NUDCD3Q8IVD9 361 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 KREMEN2Q8NCW0 462 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 VPS39Q96JC1 886 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 FEM1CQ96JP0 617 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MGME1Q9BQP7 344 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 ACE2Q9BYF1 805 aaPredicted RBP19.17■□□□□ 0.66
USP39-202ENST00000409025 MUC3BQ9H195 1237 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 SLC2A6Q9UGQ3 507 aa19.17■□□□□ 0.66
USP39-202ENST00000409025 MYO1CO00159 1063 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 TBL1XO60907 577 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 MPOP05164 745 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 SERPINF2P08697 491 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 CYP4F8P98187 520 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 CDK18Q07002 472 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 TSTD2Q5T7W7 516 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 N4BP2L1Q5TBK1 243 aaPredicted RBP19.16■□□□□ 0.66
USP39-202ENST00000409025 ATG16L1Q676U5 607 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms