RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PPP2R5BQ15173 497 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 TAF11Q15544 211 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ALG11Q2TAA5 492 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 COL28A1Q2UY09 1125 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ALG10BQ5I7T1 473 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 VWA5B1Q5TIE3 1220 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 MEX3CQ5U5Q3 659 aaKnown RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 PAPD7Q5XG87 772 aaKnown RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CDC73Q6P1J9 531 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 AAGABQ6PD74 315 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC2A7Q6PXP3 512 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CCDC129Q6ZRS4 1044 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 FAM57BQ71RH2 274 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 NOXA1Q86UR1 476 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 GPSM1Q86YR5 675 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CADM3Q8N126 398 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADSSL1Q8N142 457 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 INTS12Q96CB8 462 aaKnown RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SPAG4Q9NPE6 437 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 NRBP1Q9UHY1 535 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 RAP2CQ9Y3L5 183 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 LAS1LQ9Y4W2 734 aaKnown RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLDN16Q9Y5I7 305 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SETD1BQ9UPS6 1966 aaKnown RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 MST1RQ04912 1400 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM247A6NEH6 219 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 KCNU1A8MYU2 1149 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 PTGES3LE9PB15 166 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CYR61O00622 381 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 PPP6CO00743 305 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 AKAP8O43823 692 aaKnown RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ATP2C2O75185 946 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 LATS1O95835 1130 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CD63P08962 238 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 EPHB2P29323 1055 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TTKP33981 857 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 HOXD13P35453 343 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CPOXP36551 454 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 GNAQP50148 359 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLCNKBP51801 687 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 EIF3BP55884 814 aaKnown RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TGFB2P61812 414 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 RPL7AP62424 266 aaKnown RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 OLR1P78380 273 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 GHRHRQ02643 423 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 GAD2Q05329 585 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 GRIK3Q13003 919 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 RUNX2Q13950 521 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 KCTD2Q14681 263 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 SMTNL2Q2TAL5 461 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 SPATA1Q5VX52 437 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZKSCAN2Q63HK3 967 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 KLHL24Q6TFL4 600 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 HORMAD2Q8N7B1 307 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 CCDC89Q8N998 374 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM116Q8NCL8 245 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZMIZ2Q8NF64 920 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 OR4N2Q8NGD1 307 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 HDAC7Q8WUI4 952 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TIGD1Q96MW7 591 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 BBS4Q96RK4 519 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TKTL2Q9H0I9 626 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZNF70Q9UC06 446 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 VPS28Q9UK41 221 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZNF215Q9UL58 517 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 PCDHGB4Q9UN71 923 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 RABGAP1Q9Y3P9 1069 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADAM18Q9Y3Q7 739 aa4.11□□□□□ -1.75
HMGB1P17-201ENST00000403495 TRBV5-3A0A0A0MS03 114 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 hCG_1807616A0A1W2PRN6 198 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 HSPB2A8KAH6 182 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 BTBD18B2RXH4 712 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 K7ENM7 598 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 FIBPO43427 364 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 PROP1O75360 226 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 SEC14L2O76054 403 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 HEXAP06865 529 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 IL7RP16871 459 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 ITGAXP20702 1163 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 TNFSF8P32971 234 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 BSGP35613 385 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 PPARGP37231 505 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 IRX6P78412 446 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 HSF1Q00613 529 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 MC1RQ01726 317 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 FOXF2Q12947 444 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 CAPSQ13938 189 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 RNPS1Q15287 305 aaKnown RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 HSPB2Q16082 182 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 ASPHD1Q5U4P2 390 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIAA1614Q5VZ46 1190 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms