RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 PIP4K2CQ8TBX8 421 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 FCRL2Q96LA5 508 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 ZNF358Q9NW07 568 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 NCKIPSDQ9NZQ3 722 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 IPO11Q9UI26 975 aaKnown RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 DFFAO00273 331 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 TNFRSF10BO14763 440 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 PENKP01210 267 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 TFEBP19484 476 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 GRIA4P48058 902 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 CLCN5P51795 746 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 GALNT1Q10472 559 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 OLIG2Q13516 323 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 KCNA10Q16322 511 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 FAM26DQ5JW98 314 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 DHDDSQ86SQ9 333 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 PEX13Q92968 403 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 LPPQ93052 612 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 SPDL1Q96EA4 605 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 CELF6Q96J87 481 aaKnown RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 ECSITQ9BQ95 431 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 FSD1LQ9BXM9 530 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 AGO3Q9H9G7 860 aaKnown RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 PADI3Q9ULW8 664 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 RUVBL2Q9Y230 463 aaKnown RBP13.19□□□□□ -0.3
PRAME-203ENST00000402697 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
PRAME-203ENST00000402697 TMEM189-UBE2V1I3L0A0 370 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 DCXO43602 365 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 TADA2AO75478 443 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 TPH1P17752 444 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 ITGAXP20702 1163 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 ATP5F1P24539 256 aaPredicted RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 PPARGP37231 505 aaPredicted RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 SLC12A2P55011 1212 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 IRF9Q00978 393 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 NFE2Q16621 373 aaPredicted RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 ZFP1Q6P2D0 407 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 OTOP3Q7RTS5 596 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 TMC7Q7Z402 723 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 FSTL5Q8N475 847 aaPredicted RBP13.18□□□□□ -0.3
PRAME-203ENST00000402697 GATA6Q92908 595 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 ATXN7L3BQ96GX2 97 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 SLC39A8Q9C0K1 460 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.33e-10■□□□□ 10.4
PRAME-203ENST00000402697 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
PRAME-203ENST00000402697 FAM95CA0A1B0GW59 222 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
PRAME-203ENST00000402697 RBP1P09455 135 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 RHOQP17081 205 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 SLC5A3P53794 718 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 USP4Q13107 963 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
PRAME-203ENST00000402697 CUL3Q13618 768 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 DLG2Q15700 870 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 PSMD5Q16401 504 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 FAM83EQ2M2I3 478 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 SLC9B1Q4ZJI4 515 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 ARL13AQ5H913 290 aaPredicted RBP13.17□□□□□ -0.3
PRAME-203ENST00000402697 KLC3Q6P597 504 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
PRAME-203ENST00000402697 DEFB107AQ8IZN7 70 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 KYQ8NBH2 561 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
PRAME-203ENST00000402697 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms