RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FOXR2Q6PJQ5 311 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 PARS2Q7L3T8 475 aaKnown RBP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 RBFAQ8N0V3 343 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 WDR36Q8NI36 951 aaKnown RBP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 C1orf74Q96LT6 269 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 C1QTNF2Q9BXJ5 285 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 CEP44Q9C0F1 390 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 TCEAL2Q9H3H9 227 aaPredicted RBP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 SYNCQ9H7C4 482 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 WDR70Q9NW82 654 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 FCF1Q9Y324 198 aaKnown RBP14.83□□□□□ -0.04
VAMP1-203ENST00000400911 ACTL7AQ9Y615 435 aa14.83□□□□□ -0.04
VAMP1-203ENST00000400911 ILVBLA1L0T0 632 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 NEMP1O14524 444 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 ARHGAP6O43182 974 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 EFSO43281 561 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 GKP32189 559 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 KRT9P35527 623 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 RPIAP49247 311 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 SULT1E1P49888 294 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 CCNHP51946 323 aaPredicted RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PDX1P52945 283 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 SNX16P57768 344 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PFN3P60673 137 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PTK2Q05397 1052 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 SLC20A2Q08357 652 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 ARL13BQ3SXY8 428 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PRRT3Q5FWE3 981 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PRICKLE2Q7Z3G6 844 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 CLEC14AQ86T13 490 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 SLC35F3Q8IY50 421 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PCDH20Q8N6Y1 951 aaKnown RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 BTN2A2Q8WVV5 523 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 BOCQ9BWV1 1114 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 ZDHHC6Q9H6R6 413 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PLCB1Q9NQ66 1216 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 RRN3Q9NYV6 651 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 SPASTQ9UBP0 616 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 GGT7Q9UJ14 662 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 PNMA8BQ9ULN7 279 aaPredicted RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 ITM2BQ9Y287 266 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 BOD1L1Q8NFC6 3051 aa14.82□□□□□ -0.04
VAMP1-203ENST00000400911 TP53BP1Q12888 1972 aaPredicted RBP14.82□□□□□ -0.04
VAMP1-203ENST00000400911 MAST4O15021 2626 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 IGLV3-10A0A075B6K4 115 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 C16orf96A6NNT2 1141 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 BIN1O00499 593 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 YY2O15391 372 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 TSPAN6O43657 245 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 ABL2P42684 1182 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 ARF5P84085 180 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 ZNF783Q6ZMS7 281 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 CREBRFQ8IUR6 639 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 RYBPQ8N488 228 aaPredicted RBP14.81□□□□□ -0.04
VAMP1-203ENST00000400911 EXD3Q8N9H8 876 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 SHC3Q92529 594 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 GLMNQ92990 594 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 NT5C3BQ969T7 300 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 PGAP3Q96FM1 320 aaPredicted RBP14.81□□□□□ -0.04
VAMP1-203ENST00000400911 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 CCNL2Q96S94 520 aaPredicted RBP14.81□□□□□ -0.04
VAMP1-203ENST00000400911 TBCBQ99426 244 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 CCDC3Q9BQI4 270 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 TM6SF2Q9BZW4 377 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 SYNDIG1Q9H7V2 258 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 ATP13A1Q9HD20 1204 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.81□□□□□ -0.04
VAMP1-203ENST00000400911 APEX2Q9UBZ4 518 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 ZNF212Q9UDV6 495 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 APOBEC3BQ9UH17 382 aaKnown RBP14.81□□□□□ -0.04
VAMP1-203ENST00000400911 STAP1Q9ULZ2 295 aa14.81□□□□□ -0.04
VAMP1-203ENST00000400911 CCDC187A0A096LP49 1063 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 FAM170AA1A519 330 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 LMO7DNF2Z398 122 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 CD160O95971 181 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 F9P00740 461 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 ANXA6P08133 673 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 ITGA2BP08514 1039 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 GNA12Q03113 381 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 NFATC3Q12968 1075 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 PAK1Q13153 545 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 MORC3Q14149 939 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 SPIDRQ14159 915 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 SLC25A52Q3SY17 297 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 C6orf132Q5T0Z8 1188 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 FAXCQ5TGI0 409 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 SLC47A2Q86VL8 602 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 PHACTR4Q8IZ21 702 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 ASB12Q8WXK4 309 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 NAT6Q93015 286 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 RAB7BQ96AH8 199 aa14.8□□□□□ -0.04
VAMP1-203ENST00000400911 CENPTQ96BT3 561 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms