RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PYCARD-AS1I3L0S3 204 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 AQP9O43315 295 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 LZTS3O60299 673 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 FGFR1OPO95684 399 aaKnown RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 KRT10P13645 584 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 ACVRL1P37023 503 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 DUSP3P51452 185 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 ERVPABLB-1P60509 514 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 SLC25A52Q3SY17 297 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 CARD16Q5EG05 197 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 LRRC73Q5JTD7 316 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 PERM1Q5SV97 790 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 DPY19L2P1Q6NXN4 242 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 XYLT1Q86Y38 959 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 LSMEM2Q8N112 164 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 PCDH20Q8N6Y1 951 aaKnown RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 LMX1AQ8TE12 382 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 VOPP1Q96AW1 172 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-201ENST00000400540 FEM1CQ96JP0 617 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 C1orf74Q96LT6 269 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 HEPHQ9BQS7 1158 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 CEP44Q9C0F1 390 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 NDFIP2Q9NV92 336 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 RWDD2AQ9UIY3 292 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
LINC00544-201ENST00000400540 ILVBLA1L0T0 632 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
LINC00544-201ENST00000400540 H3BM21 787 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 FPGTO14772 594 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 AP1G1O43747 822 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 GCATO75600 419 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 JUNDP17535 347 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 RABIFP47224 123 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 PDX1P52945 283 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 UCNP55089 124 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 SNX16P57768 344 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 RHDQ02161 417 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 GNA12Q03113 381 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 C1orf61Q13536 156 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 KIAA1614Q5VZ46 1190 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 RETSATQ6NUM9 610 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 FOXR1Q6PIV2 292 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 LEKR1Q6ZMV7 388 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 BNIPLQ7Z465 357 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 FAM71AQ8IYT1 594 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 FAM174AQ8TBP5 190 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 TTC9Q92623 222 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 C1QTNF2Q9BXJ5 285 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 ZYG11BQ9C0D3 744 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 THSD1Q9NS62 852 aa12.13□□□□□ -0.47
LINC00544-201ENST00000400540 IPO11Q9UI26 975 aaKnown RBP12.13□□□□□ -0.47
LINC00544-201ENST00000400540 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 C16orf96A6NNT2 1141 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 J3QKU1 62 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 MUSKO15146 869 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 F9P00740 461 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 CELA2BP08218 269 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 CDH5P33151 784 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 IGFALSP35858 605 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 MTIF2P46199 727 aaKnown RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 GABRB2P47870 512 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 PFN3P60673 137 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 SKOR1P84550 965 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 VAC14Q08AM6 782 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 RAPGEF1Q13905 1077 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 NR0B2Q15466 257 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 ZNF783Q6ZMS7 281 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 SLC35F3Q8IY50 421 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 RYBPQ8N488 228 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 EMC1Q8N766 993 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 TMEM35BQ8NCS4 154 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 COL26A1Q96A83 441 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 C18orf8Q96DM3 657 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 MAGEB5Q9BZ81 275 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 DPH1Q9BZG8 443 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
LINC00544-201ENST00000400540 PAXBP1Q9Y5B6 917 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 CSNK1G3Q9Y6M4 447 aa12.12□□□□□ -0.47
LINC00544-201ENST00000400540 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 UGT2B4P06133 528 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 CYP11B1P15538 503 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 ITIH2P19823 946 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms