RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FOXJ1Q92949 421 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 TBATAQ96M53 351 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 CINPQ9BW66 212 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 SLC25A51Q9H1U9 297 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 ETNK2Q9NVF9 386 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 TRIM10Q9UDY6 481 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 EVLQ9UI08 416 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 DNAI1Q9UI46 699 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 NCKAP1Q9Y2A7 1128 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 BDP1A6H8Y1 2624 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 TMEM110-MUSTN1A8MSY1 372 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 SMAPO00193 183 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 FZD6O60353 706 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 CST8O60676 142 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 SIN3BO75182 1162 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 STK10O94804 968 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 EPN2O95208 641 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 MAGEA6P43360 314 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 MMP13P45452 471 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 FNTAP49354 379 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 NAP1L1P55209 391 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 POLR2LP62875 67 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 ELP6Q0PNE2 266 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 SIX1Q15475 284 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 OASLQ15646 514 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 CST6Q15828 149 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 GLIPR1L2Q4G1C9 344 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 ATP13A4Q4VNC1 1196 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 C2orf27AQ580R0 203 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 NAIF1Q69YI7 327 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 LAIR1Q6GTX8 287 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 IQCHQ86VS3 1027 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 ATP11CQ8NB49 1132 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 PRSS33Q8NF86 280 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 CCHCR1Q8TD31 782 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 IMP4Q96G21 291 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 TEKT5Q96M29 485 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 FCRL5Q96RD9 977 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 MCCC1Q96RQ3 725 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 CDH19Q9H159 772 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 ATP13A3Q9H7F0 1226 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 EIF2B3Q9NR50 452 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 RAD18Q9NS91 495 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 CCDC188H7C350 402 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 CBX4O00257 560 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 KRIT1O00522 736 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 TRAFD1O14545 582 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 LATO43561 262 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 TSPAN6O43657 245 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 PYGLP06737 847 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 EPHX1P07099 455 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 DCNP07585 359 aaKnown RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 HOXC4P09017 264 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 CCNB1P14635 433 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 NDUFV2P19404 249 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 SERPINA4P29622 427 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 MARCKSL1P49006 195 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 TCF15Q12870 199 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 SLC10A2Q12908 348 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 MMRN1Q13201 1228 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 MPP3Q13368 585 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 TEX44Q53QW1 395 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 OR2T34Q8NGX1 318 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 DNASE2BQ8WZ79 361 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 LRRC45Q96CN5 670 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 ZNF419Q96HQ0 510 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 NAPGQ99747 312 aaPredicted RBP7.63□□□□□ -1.19
USP16-204ENST00000399976 RIMKLBQ9ULI2 386 aa7.63□□□□□ -1.19
USP16-204ENST00000399976 IGHV1OR15-9A0A0B4J2B8 117 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 TCRBV21S2A2A0A5A6 115 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 GOLGA6CA6NDK9 693 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 GOLGA6BA6NDN3 693 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 ESPNB1AK53 854 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 TRIM24O15164 1050 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 SNAP91O60641 907 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 DNTTP04053 509 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 GOLGA6DP0CG33 693 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 ZNF30P17039 623 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 CTSOP43234 321 aaPredicted RBP7.62□□□□□ -1.19
USP16-204ENST00000399976 SSR1P43307 286 aaKnown RBP7.62□□□□□ -1.19
USP16-204ENST00000399976 GRIA4P48058 902 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 NEK3P51956 506 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 ETF1P62495 437 aaKnown RBP7.62□□□□□ -1.19
USP16-204ENST00000399976 ZNF235Q14590 738 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 PMS2CLQ68D20 193 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 CPNE8Q86YQ8 564 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 NDUFAF2Q8N183 169 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 TTC8Q8TAM2 541 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 PEX13Q92968 403 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 SIPA1Q96FS4 1042 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 MAGEB5Q9BZ81 275 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 GBA3Q9H227 469 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 ARNT2Q9HBZ2 717 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 LZTFL1Q9NQ48 299 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 RBM12Q9NTZ6 932 aaKnown RBP7.62□□□□□ -1.19
USP16-204ENST00000399976 GOLGA6AQ9NYA3 693 aa7.62□□□□□ -1.19
USP16-204ENST00000399976 WSB2Q9NYS7 404 aaPredicted RBP7.62□□□□□ -1.19
USP16-204ENST00000399976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
USP16-204ENST00000399976 PHTF1Q9UMS5 762 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms