RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 FEM1CQ96JP0 617 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 WDR24Q96S15 920 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 CCL5P13501 91 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 IDSP22304 550 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 POLD2P49005 469 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 ACTRT2Q8TDY3 377 aa12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 RMND5BQ96G75 393 aaPredicted RBP12.19□□□□□ -0.46
CACNA1C-213ENST00000399629 BCLAF3A2AJT9 711 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 CES1P23141 567 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SLC1A6P48664 564 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ZDHHC20Q5W0Z9 365 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ZNF473Q8WTR7 871 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 BRINP2Q9C0B6 783 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 NDUFAF1Q9Y375 327 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 FRMPD4Q14CM0 1322 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 A0A1W2PQH9 124 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 EIF3HO15372 352 aaKnown RBP eCLIP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 DUSP11O75319 330 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 KCNH1O95259 989 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ECDO95905 644 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PRNPP04156 253 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 GYPCP04921 128 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 NR2F1P10589 423 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 GP5P40197 560 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 CLCC1Q96S66 551 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SEMA4BQ9NPR2 832 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 BTBD7Q9P203 1132 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ERVK-11Q9UQG0 969 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 H2AFXP16104 143 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 RPL3P39023 403 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PLGLB1Q02325 96 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 TUSC3Q13454 348 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 LRRC32Q14392 662 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PARP6Q2NL67 630 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 KCNT2Q6UVM3 1135 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 IZUMO1Q8IYV9 350 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PCDH12Q9NPG4 1184 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 IL17RBQ9NRM6 502 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SAC3D1A6NKF1 404 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 AOC2O75106 756 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 GAD2Q05329 585 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 VITQ6UXI7 678 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 EXOC2Q96KP1 924 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 OLFM1Q99784 485 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PCDH9Q9HC56 1237 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PHTF1Q9UMS5 762 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 FPGTO14772 594 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 BUD23O43709 281 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 ERAL1O75616 437 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 FCGR1AP12314 374 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 CCNB1P14635 433 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 CORO1AP31146 461 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 PCID2Q5JVF3 399 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 GALNT7Q86SF2 657 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 SH2D3CQ8N5H7 860 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 TOP6BLQ8N6T0 577 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 OR6K2Q8NGY2 324 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-213ENST00000399629 BCL9O00512 1426 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 ABHD14A-ACY1A0A1B0GW23 586 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 HOXB8P17481 243 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 FSHRP23945 695 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 GSTM5P46439 218 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 RTP1P59025 263 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 PURAQ00577 322 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 ILF3Q12906 894 aaKnown RBP eCLIP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 DUSP28Q4G0W2 176 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 N4BP2L1Q5TBK1 243 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 DNAJC14Q6Y2X3 702 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 CFAP52Q8N1V2 620 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 ATP6V1C2Q8NEY4 427 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 KLRG1Q96E93 195 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 INVSQ9Y283 1065 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 MIPP30301 263 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 PTPN9P43378 593 aa12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 SARSP49591 514 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-213ENST00000399629 CAP1Q01518 475 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms