RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 DNA2P51530 1060 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 SUOXP51687 545 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 DYNLT1P63172 113 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 ADCY2Q08462 1091 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 SLC10A7Q0GE19 358 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 KLF1Q13351 362 aaPredicted RBP17.92■□□□□ 0.46
CTNS-203ENST00000399306 SEL1L2Q5TEA6 688 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 DCAF12L1Q5VU92 463 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 LEKR1Q6ZMV7 388 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 NETO2Q8NC67 525 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
CTNS-203ENST00000399306 CHST14Q8NCH0 376 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 CCNYQ8ND76 341 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 CADM4Q8NFZ8 388 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 SPOCK2Q92563 424 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 ZNF641Q96N77 438 aaPredicted RBP17.92■□□□□ 0.46
CTNS-203ENST00000399306 IL12RB2Q99665 862 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 TLR10Q9BXR5 811 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 FRMD8P1Q9BZ68 369 aaPredicted RBP17.92■□□□□ 0.46
CTNS-203ENST00000399306 SLC6A17Q9H1V8 727 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 DKK3Q9UBP4 350 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.91■□□□□ 0.46
CTNS-203ENST00000399306 A0A1W2PQ67 120 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 LEFTY1O75610 366 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 CCNB1P14635 433 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 CR2P20023 1033 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 ITGB7P26010 798 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 DRD3P35462 400 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 PSMD8P48556 350 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 NHLH1Q02575 133 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 SIM2Q14190 667 aaPredicted RBP17.91■□□□□ 0.46
CTNS-203ENST00000399306 PRKD1Q15139 912 aaPredicted RBP17.91■□□□□ 0.46
CTNS-203ENST00000399306 NOMO1Q15155 1222 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 ELF2Q15723 593 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 PLK5Q496M5 336 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 NPNTQ6UXI9 565 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 CEP68Q76N32 757 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 SRLQ86TD4 932 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 ZSCAN30Q86W11 494 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 VOPP1Q96AW1 172 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 NUDCD1Q96RS6 583 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 VAT1Q99536 393 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 OMDQ99983 421 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 HEMGNQ9BXL5 484 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 BTBD1Q9H0C5 482 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 DUSP15Q9H1R2 295 aaPredicted RBP17.91■□□□□ 0.46
CTNS-203ENST00000399306 DYRK4Q9NR20 520 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 FBXL12Q9NXK8 326 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 SARDHQ9UL12 918 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTNS-203ENST00000399306 R4GN57 208 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 THADAQ6YHU6 1953 aa17.91■□□□□ 0.46
CTNS-203ENST00000399306 C10orf142B7Z368 130 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 BNIP3LO60238 219 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 PECAM1P16284 738 aaPredicted RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 DPP6P42658 865 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 ZNF805Q5CZA5 627 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 ARSIQ5FYB1 569 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 ATXN7L2Q5T6C5 722 aaPredicted RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 PMS2CLQ68D20 193 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 LPCAT2Q7L5N7 544 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 AADATQ8N5Z0 425 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 TFB1MQ8WVM0 346 aaKnown RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 MAIP1Q8WWC4 291 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 FOXJ1Q92949 421 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 RAB7BQ96AH8 199 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 HAUS1Q96CS2 278 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 LGMNQ99538 433 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 FERMT1Q9BQL6 677 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 POLR1EQ9GZS1 481 aaKnown RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 ZDHHC6Q9H6R6 413 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 ATP13A3Q9H7F0 1226 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 MBD1Q9UIS9 605 aaPredicted RBP17.9■□□□□ 0.46
CTNS-203ENST00000399306 CYP8B1Q9UNU6 501 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 CEP192Q8TEP8 1941 aa17.9■□□□□ 0.46
CTNS-203ENST00000399306 NUMA1Q14980 2115 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 TSPAN11A1L157 253 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 KPNA3O00505 521 aaPredicted RBP17.89■□□□□ 0.45
CTNS-203ENST00000399306 KRIT1O00522 736 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 SOCS5O75159 536 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 SLC45A4Q5BKX6 768 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 NEK5Q6P3R8 708 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 GDPD4Q6W3E5 623 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 RYBPQ8N488 228 aaPredicted RBP17.89■□□□□ 0.45
CTNS-203ENST00000399306 HDDC3Q8N4P3 179 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 SUMF1Q8NBK3 374 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 RLN3Q8WXF3 142 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 TOE1Q96GM8 510 aaKnown RBP17.89■□□□□ 0.45
CTNS-203ENST00000399306 ZNF419Q96HQ0 510 aaPredicted RBP17.89■□□□□ 0.45
CTNS-203ENST00000399306 QKIQ96PU8 341 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTNS-203ENST00000399306 HERPUD2Q9BSE4 406 aa17.89■□□□□ 0.45
CTNS-203ENST00000399306 RBM22Q9NW64 420 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTNS-203ENST00000399306 EVLQ9UI08 416 aaPredicted RBP17.89■□□□□ 0.45
CTNS-203ENST00000399306 ZKSCAN5Q9Y2L8 839 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms