RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KCTD6Q8NC69 237 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 FAM71BQ8TC56 605 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TM9SF3Q9HD45 589 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TMEM9BQ9NQ34 198 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DYRK4Q9NR20 520 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LHX3Q9UBR4 397 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 INTUQ9ULD6 942 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PCDHA13Q9Y5I0 950 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 A0A1W2PPC4 97 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 INSIG1O15503 277 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SLC7A4O43246 635 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PALMO75781 387 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 POP4O95707 220 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 UGT2B4P06133 528 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 FECHP22830 423 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAN1A1P33908 653 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ARHGAP25P42331 645 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZFYVE27Q5T4F4 411 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ERN2Q76MJ5 926 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LZTR1Q8N653 840 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TSEN2Q8NCE0 465 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CASKIN2Q8WXE0 1202 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PPP1R16AQ96I34 528 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GDAP1L1Q96MZ0 367 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RTKNQ9BST9 563 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SP110Q9HB58 689 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 IPO11Q9UI26 975 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LCMT1Q9UIC8 334 aa14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KNL1Q8NG31 2342 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TM4SF5O14894 197 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 WNT9AO14904 365 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 NDUFA10O95299 355 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KRT7P08729 469 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SDHBP21912 280 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ITGB7P26010 798 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CYLC1P35663 651 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RGRP47804 291 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CCR5P51681 352 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ATXN3P54252 364 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 BNC1Q01954 994 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GRIK2Q13002 908 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SPA17Q15506 151 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 UAP1L1Q3KQV9 507 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RAD9BQ6WBX8 426 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PARS2Q7L3T8 475 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PCDH19Q8TAB3 1148 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SLC6A18Q96N87 628 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 HDAC8Q9BY41 377 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KDM4CQ9H3R0 1056 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GOLPH3Q9H4A6 298 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RCOR3Q9P2K3 495 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CACNA1EQ15878 2313 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SPEGQ15772 3267 aa14.3□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PCDH15Q96QU1 1955 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 A0A1B0GVT2 93 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RCCD1A6NED2 376 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 C16orf96A6NNT2 1141 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LATO43561 262 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAP3K6O95382 1288 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 IGSF6O95976 241 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TNNT1P13805 278 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ADRB3P13945 408 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KDELR1P24390 212 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CDC25BP30305 580 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 NEK3P51956 506 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 IL10RBQ08334 325 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PDK2Q15119 407 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TCEAL1Q15170 157 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ANKRD20A8PQ5CZ79 823 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 FBXL19Q6PCT2 694 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DGLUCYQ7Z3D6 616 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TMTC1Q8IUR5 882 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MINDY1Q8N5J2 469 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KLK6Q92876 244 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LRIG1Q96JA1 1093 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KLHL32Q96NJ5 620 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SPTBN2O15020 2390 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MUSKO15146 869 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MFSD11O43934 449 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAFKO60675 156 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RNGTTO60942 597 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GJB3O75712 270 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PCDH8O95206 1070 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PIGNO95427 931 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SYPP08247 313 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 COMTP21964 271 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SERPINB6P35237 376 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RACK1P63244 317 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SLC10A7Q0GE19 358 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CCDC15Q0P6D6 951 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZNF805Q5CZA5 627 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LRRC73Q5JTD7 316 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms