RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 PGBD5Q8N414 524 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 SPACA7Q96KW9 195 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 PSKH2Q96QS6 385 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 FBXL12Q9NXK8 326 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 MBD1Q9UIS9 605 aaPredicted RBP25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 C1QTNF3-AMACRE9PGA6 284 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 PPP1R12AO14974 1030 aaPredicted RBP25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 RNASEH2AO75792 299 aaKnown RBP25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 PRNPP04156 253 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 MMP13P45452 471 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 PRR23BQ6ZRT6 265 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 PLPP6Q8IY26 295 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 VOPP1Q96AW1 172 aa25.74■■□□□ 1.71
TMEM55B-202ENST00000398020 APOC4-APOC2K7ER74 178 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 KIF5CO60282 957 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 TJP3O95049 919 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 POP4O95707 220 aaKnown RBP25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 APOC2P02655 101 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 C7P10643 843 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 C5AR1P21730 350 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 CNR2P34972 360 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 MAXP61244 160 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 SIM2Q14190 667 aaPredicted RBP25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 LPAL2Q16609 132 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 FAM46CQ5VWP2 391 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 HDDC3Q8N4P3 179 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 TMIEQ8NEW7 156 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 OMDQ99983 421 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 NT5MQ9NPB1 228 aa25.73■■□□□ 1.71
TMEM55B-202ENST00000398020 TCRBV7S2A1N4TA0A589 114 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 MAP3K13O43283 966 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 CCNB1P14635 433 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 CXCR5P32302 372 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 DRD3P35462 400 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 HNRNPDQ14103 355 aaKnown RBP25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 SEL1L2Q5TEA6 688 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 BZW1Q7L1Q6 419 aaKnown RBP25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 ACTL9Q8TC94 416 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 UBE2Q2Q8WVN8 375 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 MAML1Q92585 1016 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 TOE1Q96GM8 510 aaKnown RBP25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 PHOX2BQ99453 314 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 CEP41Q9BYV8 373 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 SEPT10Q9P0V9 454 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 SCML1Q9UN30 329 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 TTLL3Q9Y4R7 772 aa25.72■■□□□ 1.71
TMEM55B-202ENST00000398020 UGT2B4P06133 528 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 SCNN1BP51168 640 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 RENBPP51606 427 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 OTUD4Q01804 1114 aaKnown RBP25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 NHLH1Q02575 133 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 BYSLQ13895 437 aaKnown RBP25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 NUMA1Q14980 2115 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 KBTBD6Q86V97 674 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 ABCA7Q8IZY2 2146 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 BBS5Q8N3I7 341 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 DEFB119Q8N690 84 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 TEX26Q8N6G2 289 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 ARRDC3Q96B67 414 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 NEUROG2Q9H2A3 272 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 C10orf88Q9H8K7 445 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 RBM22Q9NW64 420 aaKnown RBP eCLIP25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 JRKLQ9Y4A0 524 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 PLXND1Q9Y4D7 1925 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 GOLGA6L9A6NEM1 432 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 PIGNO95427 931 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 JCHAINP01591 159 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 CD6P30203 668 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 ACSL1P33121 698 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 NBL1P41271 181 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 CNTN1Q12860 1018 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 ZBTB17Q13105 803 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 SRLQ86TD4 932 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 TFB1MQ8WVM0 346 aaKnown RBP25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 CARD9Q9H257 536 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 NCKAP1Q9Y2A7 1128 aa25.71■■□□□ 1.71
TMEM55B-202ENST00000398020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 IGLV3-19P01714 112 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 RPL6Q02878 288 aaKnown RBP25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 RAD51Q06609 339 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 KLF1Q13351 362 aaPredicted RBP25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 PRKD1Q15139 912 aaPredicted RBP25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 NOMO1Q15155 1222 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 USP30Q70CQ3 517 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 ADAT2Q7Z6V5 191 aaKnown RBP25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 TMEFF1Q8IYR6 380 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 FATE1Q969F0 183 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 NSMCE3Q96MG7 304 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 WSB2Q9NYS7 404 aaPredicted RBP25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 SDK1Q7Z5N4 2213 aa25.7■■□□□ 1.7
TMEM55B-202ENST00000398020 NEBLO76041 1014 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 ITKQ08881 620 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 NSUN2Q08J23 767 aaKnown RBP eCLIP25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 GDPD4Q6W3E5 623 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 KLHL32Q96NJ5 620 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 MGME1Q9BQP7 344 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 GPR174Q9BXC1 333 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 BRD8Q9H0E9 1235 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms