RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 WFDC5Q8TCV5 224 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 MGARPQ8TDB4 240 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 RIPOR3Q96MK2 946 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 ATP13A1Q9HD20 1204 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 RBM22Q9NW64 420 aaKnown RBP eCLIP19.64■□□□□ 0.734e-6■■■■□ 24.3
PDLIM2-204ENST00000397760 PRRC2BQ5JSZ5 2229 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 KDELR3O43731 214 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 NEBLO76041 1014 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 TMEM63AO94886 807 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 APRTP07741 180 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 MAGEA6P43360 314 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 RENBPP51606 427 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 OXCT1P55809 520 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 BNIP1Q12981 228 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 ADGRG2Q8IZP9 1017 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 IRF7Q92985 503 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 ACE2Q9BYF1 805 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 GBA3Q9H227 469 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 YY1AP1Q9H869 796 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 SPHK2Q9NRA0 654 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 C2orf16Q68DN1 1984 aa19.63■□□□□ 0.73
PDLIM2-204ENST00000397760 VGLL3A8MV65 326 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 MZF1P28698 734 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 MARC1Q5VT66 337 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 KIAA1958Q8N8K9 716 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 BPIFB1Q8TDL5 484 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 ZNF419Q96HQ0 510 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 GAS2L1Q99501 681 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 BBS2Q9BXC9 721 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 TRPV4Q9HBA0 871 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 ABCF3Q9NUQ8 709 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 KLHL14Q9P2G3 628 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 CLEC4EQ9ULY5 219 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 HELZP42694 1942 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 NEDD8-MDP1E9PL57 170 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 ASMTLO95671 621 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 PENKP01210 267 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 NFKB1P19838 968 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 GCAP28676 217 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 CSKP41240 450 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 GAD2Q05329 585 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 SLC10A7Q0GE19 358 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 COL19A1Q14993 1142 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 LY6G5CQ5SRR4 150 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 WLSQ5T9L3 541 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 FIBINQ8TAL6 211 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 DENND1AQ8TEH3 1009 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 LRCH3Q96II8 777 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 MSLNLQ96KJ4 702 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 FEM1AQ9BSK4 669 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 PDFQ9HBH1 243 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 DUS2Q9NX74 493 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 STARD13Q9Y3M8 1113 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 TTLL3Q9Y4R7 772 aa19.62■□□□□ 0.73
PDLIM2-204ENST00000397760 HEPACAM2A8MVW5 462 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 CBX4O00257 560 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 HLA-DQB2P05538 268 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TPSB2P20231 275 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TAC1P20366 129 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 GLDCP23378 1020 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 PHBP35232 272 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 MTHFRP42898 656 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 SPARCL1Q14515 664 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 LBRQ14739 615 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TMED2Q15363 201 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TPSAB1Q15661 275 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 OTOP3Q7RTS5 596 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TEX26Q8N6G2 289 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 ST13P5Q8NFI4 369 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 OSCP1Q8WVF1 389 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 ZNF599Q96NL3 588 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 MYADMQ96S97 322 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 GLOD4Q9HC38 313 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 OBP2AQ9NY56 170 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 KIAA1522Q9P206 1035 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 TBK1Q9UHD2 729 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 OR51B4Q9Y5P0 310 aa19.61■□□□□ 0.73
PDLIM2-204ENST00000397760 UBOX5O94941 541 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 GBP2P32456 591 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 CBLBQ13191 982 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 PREPLQ4J6C6 727 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 TMCO4Q5TGY1 634 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 TANGO2Q6ICL3 276 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 PDCD7Q8N8D1 485 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 GDAP1Q8TB36 358 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 SMC6Q96SB8 1091 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 GORASP1Q9BQQ3 440 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 ZFP14Q9HCL3 533 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 NT5MQ9NPB1 228 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 PSMC3IPQ9P2W1 217 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 NYNRINQ9P2P1 1898 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 TYRP14679 529 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 FCARP24071 287 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 ARL4CP56559 192 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 LMAN2Q12907 356 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 PRPSAP1Q14558 356 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 HIF1AQ16665 826 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 MCUQ8NE86 351 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms