RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GOLGA6DP0CG33 693 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 DGKGP49619 791 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 GEMIN4P57678 1058 aaKnown RBP27.89■■■□□ 2.06
CPNE1-203ENST00000397442 SKOR1P84550 965 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 MPP3Q13368 585 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 RUNX3Q13761 415 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 TRMT10CQ7L0Y3 403 aaKnown RBP27.89■■■□□ 2.06
CPNE1-203ENST00000397442 UBLCP1Q8WVY7 318 aaPredicted RBP27.89■■■□□ 2.06
CPNE1-203ENST00000397442 CASS4Q9NQ75 786 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 VPS45Q9NRW7 570 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 GOLGA6AQ9NYA3 693 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 SLC27A6Q9Y2P4 619 aa27.89■■■□□ 2.06
CPNE1-203ENST00000397442 ARNTLO00327 626 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 PMPCBO75439 489 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 SLC20A2Q08357 652 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 MESP2Q0VG99 397 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 KYNUQ16719 465 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 IGDCC3Q8IVU1 814 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 IQCKQ8N0W5 287 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 AHI1Q8N157 1196 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 IPMKQ8NFU5 416 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 OR52K1Q8NGK4 314 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 EXOC2Q96KP1 924 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 PIH1D1Q9NWS0 290 aaKnown RBP27.88■■■□□ 2.05
CPNE1-203ENST00000397442 GTSE1Q9NYZ3 720 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 TEX264Q9Y6I9 313 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 KIAA1549LQ6ZVL6 1849 aa27.88■■■□□ 2.05
CPNE1-203ENST00000397442 RIPK2O43353 540 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 TTC4O95801 387 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 GDI1P31150 447 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 SLC6A11P48066 632 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 ANKMY2Q8IV38 441 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 CPA6Q8N4T0 437 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 TTC17Q96AE7 1141 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 RPL10LQ96L21 214 aaKnown RBP27.87■■■□□ 2.05
CPNE1-203ENST00000397442 SIGLEC10Q96LC7 697 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 APOL2Q9BQE5 337 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 TRMT61BQ9BVS5 477 aaKnown RBP27.87■■■□□ 2.05
CPNE1-203ENST00000397442 VIPAS39Q9H9C1 493 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 HAUS2Q9NVX0 235 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 HS3ST2Q9Y278 367 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 PRUNE2Q8WUY3 3088 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 ATP8B1O43520 1251 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 AGTP01019 485 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 FOSL2P15408 326 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 STK19P49842 368 aaPredicted RBP27.87■■■□□ 2.05
CPNE1-203ENST00000397442 WNT3AP56704 352 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 SKIV2LQ15477 1246 aaKnown RBP27.87■■■□□ 2.05
CPNE1-203ENST00000397442 MBLAC2Q68D91 279 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 NAPEPLDQ6IQ20 393 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 CHFRQ96EP1 664 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 TBL1YQ9BQ87 522 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 NOD2Q9HC29 1040 aa27.87■■■□□ 2.05
CPNE1-203ENST00000397442 ZNF821O75541 412 aaPredicted RBP27.86■■■□□ 2.05
CPNE1-203ENST00000397442 SRCP12931 536 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 ELK3P41970 407 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 NSUN2Q08J23 767 aaKnown RBP eCLIP27.86■■■□□ 2.05
CPNE1-203ENST00000397442 DENND5AQ6IQ26 1287 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 RANBP10Q6VN20 620 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 RNF135Q8IUD6 432 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 MPP5Q8N3R9 675 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 DEFB123Q8N688 67 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 FBXO36Q8NEA4 188 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 PPM1EQ8WY54 764 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 NUDCD1Q96RS6 583 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 FICDQ9BVA6 458 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 MIA3Q5JRA6 1907 aa27.86■■■□□ 2.05
CPNE1-203ENST00000397442 C2CD4DB7Z1M9 353 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 SCNN1BP51168 640 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 RHOAP61586 193 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 ECT2LQ008S8 904 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 SULT2A1Q06520 285 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 NR1H3Q13133 447 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 SLC29A2Q14542 456 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 LINC00523Q86TU6 105 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 PHTF2Q8N3S3 785 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 TTC8Q8TAM2 541 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 LRRC4CQ9HCJ2 640 aa27.85■■■□□ 2.05
CPNE1-203ENST00000397442 INSIG1O15503 277 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 ACSL3O95573 720 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 GJA4P35212 333 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 OPRD1P41143 372 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 SLC14A2Q15849 920 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 PCSK7Q16549 785 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 CCDC38Q502W7 563 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 DNAJC21Q5F1R6 531 aaKnown RBP27.84■■■□□ 2.05
CPNE1-203ENST00000397442 METTL3Q86U44 580 aaKnown RBP27.84■■■□□ 2.05
CPNE1-203ENST00000397442 SH2D3CQ8N5H7 860 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 ATP11CQ8NB49 1132 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 PYROXD1Q8WU10 500 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 LRRC39Q96DD0 335 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 CHMP2BQ9UQN3 213 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 CES1P23141 567 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 SESN2P58004 480 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-203ENST00000397442 DGKKQ5KSL6 1271 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 CFAP58Q5T655 872 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 NAIF1Q69YI7 327 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-203ENST00000397442 WFIKKN2Q8TEU8 576 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 FSD1LQ9BXM9 530 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 DEC1Q9P2X7 70 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms