RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 TANGO2Q6ICL3 276 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 VITQ6UXI7 678 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 RANBP10Q6VN20 620 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 EP400NLQ6ZTU2 488 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 TSEN2Q8NCE0 465 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 FBXO36Q8NEA4 188 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 ARRDC2Q8TBH0 407 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 WFDC5Q8TCV5 224 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SPOCK2Q92563 424 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PEX13Q92968 403 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 OXNAD1Q96HP4 312 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 LRRC3BQ96PB8 259 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 MYADMQ96S97 322 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SRPK1Q96SB4 655 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SEMA3CQ99985 751 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 POMKQ9H5K3 350 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PLK2Q9NYY3 685 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 A0A1W2PQ67 120 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 FGF1P05230 155 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 CD70P32970 193 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 RHOAP61586 193 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 ECT2LQ008S8 904 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SLC29A2Q14542 456 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 RASA2Q15283 850 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 CYTH1Q15438 398 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 KYNUQ16719 465 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 KLHL38Q2WGJ6 581 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 KDELC1Q6UW63 502 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 NLRP9Q7RTR0 991 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PRPF39Q86UA1 669 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 ETFBKMTQ8IXQ9 262 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 RIBC1Q8N443 379 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 TAB3Q8N5C8 712 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PCDH20Q8N6Y1 951 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 BHMTQ93088 406 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 RSPRY1Q96DX4 576 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 ZNF419Q96HQ0 510 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SIGLEC10Q96LC7 697 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 TRMT61BQ9BVS5 477 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 STMN4Q9H169 189 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 MRM3Q9HC36 420 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 SCUBE2Q9NQ36 999 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 DEC1Q9P2X7 70 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PLAAQ9Y263 795 aa19.28■□□□□ 0.68
TSPAN4-204ENST00000397404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 LOC285095A0A1B0GVY8 99 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 SASH3O75995 380 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 IGSF6O95976 241 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 GSRP00390 522 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 POLBP06746 335 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 PGAM1P18669 254 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 ELK3P41970 407 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 CD86P42081 329 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 WNT3AP56704 352 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 RPL26P61254 145 aaKnown RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 SNRPD1P62314 119 aaKnown RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 SKOR1P84550 965 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 RAD51Q06609 339 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 RUNX3Q13761 415 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 APCDD1Q8J025 514 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 STAMBPL1Q96FJ0 436 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 IFT43Q96FT9 208 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 MRGPRX2Q96LB1 330 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 ZIM3Q96PE6 472 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 ADGRE3Q9BY15 652 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 LRRC4CQ9HCJ2 640 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 TRPV5Q9NQA5 729 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 DNAJC17Q9NVM6 304 aaKnown RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 ZC3H7BQ9UGR2 993 aaKnown RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 RPL26L1Q9UNX3 145 aaKnown RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 FAM50BQ9Y247 325 aa19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 USP15Q9Y4E8 981 aaPredicted RBP19.27■□□□□ 0.67
TSPAN4-204ENST00000397404 ANHXE9PGG2 379 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 NPC1O15118 1278 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 SNAP91O60641 907 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 SOCS5O75159 536 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 CD160O95971 181 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 MT-CYBP00156 380 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 ALADP13716 330 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 CDK18Q07002 472 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 PUS10Q3MIT2 529 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 FUT11Q495W5 492 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 C3orf62Q6ZUJ4 267 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 PGBD5Q8N414 524 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 SH2D3CQ8N5H7 860 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 IPMKQ8NFU5 416 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 SPATA22Q8NHS9 363 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 GABPB2Q8TAK5 448 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 TUBGCP5Q96RT8 1024 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 RANBP9Q96S59 729 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 EPB41L4BQ9H329 900 aa19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 INTS6Q9UL03 887 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-204ENST00000397404 FAM237BA0A1B0GVD1 139 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 ACSL3O95573 720 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 MMP2P08253 660 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 MYZAPP0CAP1 466 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 GLDCP23378 1020 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 ATP5DP30049 168 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 NIPAL4Q0D2K0 466 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms