RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PIGVQ9NUD9 493 aa10.57□□□□□ -0.72
NEDD8-202ENST00000396828 LCMT1Q9UIC8 334 aa10.57□□□□□ -0.72
NEDD8-202ENST00000396828 DUSP10Q9Y6W6 482 aa10.57□□□□□ -0.72
NEDD8-202ENST00000396828 SETXQ7Z333 2677 aaKnown RBP10.57□□□□□ -0.72
NEDD8-202ENST00000396828 M0QYT0 321 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 MCF2LO15068 1137 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 BUB1O43683 1085 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TLX3O43711 291 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 HSF2BPO75031 334 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 GLI1P08151 1106 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 GLDCP23378 1020 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ITPKBP27987 946 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 RXRGP48443 463 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SLC6A3Q01959 620 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SULT2A1Q06520 285 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SFSWAPQ12872 951 aaKnown RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 PTP4A2Q12974 167 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 C5orf22Q49AR2 442 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 C2CD6Q53TS8 623 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 EFHC1Q5JVL4 640 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF569Q5MCW4 686 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 DNTTIP2Q5QJE6 756 aaKnown RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 RABGAP1LQ5R372 815 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 PIP5KL1Q5T9C9 394 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TTC39BQ5VTQ0 682 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 NAPEPLDQ6IQ20 393 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 DNAJC24Q6P3W2 148 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TMPRSS12Q86WS5 348 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SLC25A45Q8N413 288 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 C3orf20Q8ND61 904 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF564Q8TBZ8 553 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 OR8D1Q8WZ84 308 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ARHGEF26Q96DR7 871 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 MYOCQ99972 504 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TRIM62Q9BVG3 475 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SELENOOQ9BVL4 669 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ERVMER34-1Q9H9K5 563 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 FZD3Q9NPG1 666 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 ASNSD1Q9NWL6 643 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 SLC12A6Q9UHW9 1150 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 VPS28Q9UK41 221 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TBC1D30Q9Y2I9 924 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 PAXBP1Q9Y5B6 917 aa10.56□□□□□ -0.72
NEDD8-202ENST00000396828 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
NEDD8-202ENST00000396828 HELZ2Q9BYK8 2649 aaKnown RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 A0A087WV48 116 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 A0A0D9SEW6 157 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TRIM38O00635 465 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF821O75541 412 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 DAB1O75553 588 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 RFPL3O75679 317 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 MTA2O94776 668 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 SLC2A3P11169 496 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 MYF5P13349 255 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TNNT1P13805 278 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 JUPP14923 745 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 PRLRP16471 622 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 DESP17661 470 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 NOS2P35228 1153 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 NNMTP40261 264 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 HADHBP55084 474 aaKnown RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 RNASE9P60153 205 aaKnown RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ETF1P62495 437 aaKnown RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF177Q13360 481 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 MAMLD1Q13495 774 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ACAP1Q15027 740 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 INAVAQ3KP66 663 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 RAB6CQ53S08 254 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 PLEKHA7Q6IQ23 1121 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 FBXL19Q6PCT2 694 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 DCUN1D2Q6PH85 259 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 LINGO4Q6UY18 593 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 SLC26A9Q7LBE3 791 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 PRPF39Q86UA1 669 aaKnown RBP10.55□□□□□ -0.72
NEDD8-202ENST00000396828 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 MFSD2AQ8NA29 543 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 OR2A12Q8NGT7 310 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ARRDC3Q96B67 414 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 SKA1Q96BD8 255 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TBCBQ99426 244 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 NPY6RQ99463 290 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TKTL2Q9H0I9 626 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 RAB6CQ9H0N0 254 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 UCKL1Q9NWZ5 548 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ARHGEF38Q9NXL2 777 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms