RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 SEMA3BQ13214 749 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CDH18Q13634 790 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 KCNJ12Q14500 433 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 TPD52L1Q16890 204 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ARHGAP44Q17R89 818 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 HNRNPA1L2Q32P51 320 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 TCP11X2Q5H9J9 407 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ARTNQ5T4W7 220 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CDKAL1Q5VV42 579 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 MBLAC2Q68D91 279 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 GJB7Q6PEY0 223 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 OLFML1Q6UWY5 402 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 C11orf57Q6ZUT1 292 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 USP30Q70CQ3 517 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 BNIPLQ7Z465 357 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PIP4P1Q86T03 277 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CDH24Q86UP0 819 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF677Q86XU0 584 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 WDTC1Q8N5D0 677 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 WFDC5Q8TCV5 224 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 FAM131CQ96AQ9 280 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 SIPA1Q96FS4 1042 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PPP1R13BQ96KQ4 1090 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 MRGPRX3Q96LB0 322 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 HSPA12BQ96MM6 686 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 PPP1R9BQ96SB3 815 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CIPCQ9C0C6 399 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 MIS12Q9H081 205 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 RSPH9Q9H1X1 276 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 TNKS2Q9H2K2 1166 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ACP6Q9NPH0 428 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 SUN2Q9UH99 717 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 SLC12A6Q9UHW9 1150 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 DNAJC12Q9UKB3 198 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 ANGPTL2Q9UKU9 493 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 INTS6Q9UL03 887 aaKnown RBP6.32□□□□□ -1.4
PTPN20-208ENST00000395727 EFR3BQ9Y2G0 817 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 CEP192Q8TEP8 1941 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 NCOR2Q9Y618 2525 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
PTPN20-208ENST00000395727 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 GOLGA6L7A0A1B0GV03 622 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TARSL2A2RTX5 802 aaKnown RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 F5H5T6 163 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 F8VZ95 297 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 FOXN3O00409 490 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RGS13O14921 159 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TSPAN3O60637 253 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TBL1XO60907 577 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 MOCS3O95396 460 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 F9P00740 461 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CALCAP01258 141 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CEACAM5P06731 702 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 ACADMP11310 421 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 UCHL3P15374 230 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 GNSP15586 552 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 ABCB4P21439 1286 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TACR2P21452 398 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CD70P32970 193 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 KRT9P35527 623 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 ETV3P41162 512 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CSKP41240 450 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 MATKP42679 507 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 GSCP56915 257 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RPS14P62263 151 aaKnown RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RPS24P62847 133 aaKnown RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CDK17Q00537 523 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 SLC6A3Q01959 620 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 APBA1Q02410 837 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 SULT2A1Q06520 285 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 PLEKHG6Q3KR16 790 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TTC31Q49AM3 519 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 PTPN20Q4JDL3 420 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 DCAF6Q58WW2 860 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 BRMS1LQ5PSV4 323 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RABGAP1LQ5R372 815 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 OTUD1Q5VV17 481 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF776Q68DI1 518 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RFWD3Q6PCD5 774 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 KIAA1324Q6UXG2 1013 aaKnown RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 SLC47A2Q86VL8 602 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CHSY1Q86X52 802 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CCDC117Q8IWD4 279 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 DEFB106AQ8N104 65 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 TMEM35BQ8NCS4 154 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 MSANTD4Q8NCY6 345 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
PTPN20-208ENST00000395727 SEC16BQ96JE7 1060 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 NPY6RQ99463 290 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 SLC6A17Q9H1V8 727 aa6.31□□□□□ -1.4
PTPN20-208ENST00000395727 RETREG1Q9H6L5 497 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms