RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HADHAP40939 763 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 PCLAFQ15004 111 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 MILR1Q7Z6M3 343 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 MCRS1Q96EZ8 462 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 FBRSL1Q9HCM7 1045 aaKnown RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 GMPR2Q9P2T1 348 aaKnown RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 SUN2Q9UH99 717 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 SFMBT1Q9UHJ3 866 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 RPL26L1Q9UNX3 145 aaKnown RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 PSMD12O00232 456 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 TREHO43280 583 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 TADA2AO75478 443 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ATICP31939 592 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 RAP1GDS1P52306 607 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ARCQ7LC44 396 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 GPR142Q7Z601 462 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 DHFR2Q86XF0 187 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF567Q8N184 647 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 CATSPER1Q8NEC5 780 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ABCG8Q9H221 673 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 NCKIPSDQ9NZQ3 722 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 AFF4Q9UHB7 1163 aaKnown RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ZDHHC2Q9UIJ5 367 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 CCDC166P0CW27 439 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ALDH4A1P30038 563 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 CHRNA4P43681 627 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 MS4A2Q01362 244 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 LCLAT1Q6UWP7 414 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 NAPRTQ6XQN6 538 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 BPIFB6Q8NFQ5 453 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 LPPQ93052 612 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SELENONQ9NZV5 590 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SMIM31A0A1B0GVY4 71 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SNAI1O95863 264 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 YBX3P16989 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ENTPD1P49961 510 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 DAB2P98082 770 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 STX5Q13190 355 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 CBR4Q8N4T8 237 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ATPAF2Q8N5M1 289 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 DDHD1Q8NEL9 900 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 C16orf70Q9BSU1 422 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 C1orf50Q9BV19 199 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 FAM50BQ9Y247 325 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 FAM95CA0A1B0GW59 222 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SUPT3HB4E1H0 165 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 NRP2O60462 931 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 PRKAA1Q13131 559 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 CES4AQ5XG92 561 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SLC27A1Q6PCB7 646 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 TMCO5AQ8N6Q1 288 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 EFHBQ8N7U6 833 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 TBCDQ9BTW9 1192 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ULBP1Q9BZM6 244 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 RSL24D1Q9UHA3 163 aaKnown RBP13.37□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF180Q9UJW8 692 aa13.37□□□□□ -0.27
NFKB1-202ENST00000394820 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 YWHAQP27348 245 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 PPP1R3AQ16821 1122 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 IMPG1Q17R60 797 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 VPS26BQ4G0F5 336 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 STK32CQ86UX6 486 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 MIB1Q86YT6 1006 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 APLFQ8IW19 511 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 FRMD8Q9BZ67 464 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 RBM22Q9NW64 420 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■□□ 19
NFKB1-202ENST00000394820 EURLQ9NYK6 297 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 HACD3Q9P035 362 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 U3KQV3 271 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 DNAJC25-GNG10A0A024R161 153 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 TIMM44O43615 452 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 KCNH1O95259 989 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CELF2O95319 508 aaKnown RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 MMP3P08254 477 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms