RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 FAXCQ5TGI0 409 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 POTEHQ6S545 545 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ATG14Q6ZNE5 492 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 BBS12Q6ZW61 710 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SERINC5Q86VE9 423 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 UNC45BQ8IWX7 931 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 CRYBG2Q8N1P7 616 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 TRPC4APQ8TEL6 797 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 PDCD6IPQ8WUM4 868 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 C10orf82Q8WW14 230 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 MRPS31Q92665 395 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 USP13Q92995 863 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 SLC7A6OSQ96CW6 309 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 MCRS1Q96EZ8 462 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 VPS39Q96JC1 886 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 CNDP1Q96KN2 507 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SNRNP25Q9BV90 132 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 CHID1Q9BWS9 393 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 GPR88Q9GZN0 384 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 TKTL2Q9H0I9 626 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SEMA6AQ9H2E6 1030 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 DPEP3Q9H4B8 488 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 POLR1BQ9H9Y6 1135 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 C6orf203Q9P0P8 240 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 GJD2Q9UKL4 321 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 DNAJC16Q9Y2G8 782 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ORC6Q9Y5N6 252 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 hCG_1818297A0A087WSY0 165 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 MBLAC1A4D2B0 266 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 HACD1B0YJ81 288 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 F5H5T6 163 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 PHGDHO43175 533 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 LIASO43766 372 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 BAIAP3O94812 1187 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SLC4A1P02730 911 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ALOX5P09917 674 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 DNAJB2P25686 324 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 S100A5P33763 92 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 NNMTP40261 264 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 INPP1P49441 399 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 WDR4P57081 412 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 TRIM32Q13049 653 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 TIGD7Q6NT04 549 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 DENND5BQ6ZUT9 1274 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 STRADAQ7RTN6 431 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 UBE2Q1Q7Z7E8 422 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 AKAP14Q86UN6 197 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ITIH5Q86UX2 942 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 C11orf74Q86VG3 221 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 DCLK2Q8N568 766 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 GIPC2Q8TF65 315 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ZNF296Q8WUU4 475 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 HEPHQ9BQS7 1158 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 VRTNQ9H8Y1 702 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 GDAP2Q9NXN4 497 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 COPG2Q9UBF2 871 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SLC7A8Q9UHI5 535 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 MID2Q9UJV3 735 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 RGPD3A6NKT7 1758 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 RGPD4Q7Z3J3 1758 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 MYADML2A6NDP7 307 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PRR5-ARHGAP8B1AHC4 643 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZBTB42B2RXF5 422 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PSMD12O00232 456 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 ANXA9O76027 345 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 THRAP10827 490 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FGFR3P22607 806 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 HOXA11P31270 313 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 ARHGAP8P85298 464 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SMARCB1Q12824 385 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZNF177Q13360 481 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZNF423Q2M1K9 1284 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SLC25A52Q3SY17 297 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 INTS6LQ5JSJ4 861 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 NAPEPLDQ6IQ20 393 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SLC2A7Q6PXP3 512 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 KDELC2Q7Z4H8 507 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 NECAB2Q7Z6G3 386 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 LINC00523Q86TU6 105 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TTC7BQ86TV6 843 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CENPSQ8N2Z9 138 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FBXW8Q8N3Y1 598 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 LZTR1Q8N653 840 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PPHLN1Q8NEY8 458 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 DIS3LQ8TF46 1054 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 DDX1Q92499 740 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 GLMNQ92990 594 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UTP4Q969X6 686 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 PLEKHA8Q96JA3 519 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TWNKQ96RR1 684 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 HAPLN3Q96S86 360 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RNF38Q9H0F5 515 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 XYLT2Q9H1B5 865 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 EHD1Q9H4M9 534 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZDHHC18Q9NUE0 388 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TMEM161AQ9NX61 479 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 DNAJB4Q9UDY4 337 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PCDHB8Q9UN66 801 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms