RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GK3PQ14409 553 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 NTAN1Q96AB6 310 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 GCNAQ96QF7 691 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 NDNQ99608 321 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 FICDQ9BVA6 458 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 VCXQ9H320 206 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 CYP4F12Q9HCS2 524 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 ADAM28Q9UKQ2 775 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 CDH9Q9ULB4 789 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 CDY1Q9Y6F8 540 aa13.67□□□□□ -0.22
GTF2F1-201ENST00000394456 LAMA2P24043 3122 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 TXNDC9O14530 226 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 HNRNPLP14866 589 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 TFEBP19484 476 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 KCNA5P22460 613 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 SP3Q02447 781 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 DSC3Q14574 896 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 CNGA3Q16281 694 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 DBN1Q16643 649 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 RAB41Q5JT25 222 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 PTAR1Q7Z6K3 402 aaPredicted RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 DQX1Q8TE96 717 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 GPR22Q99680 433 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ZNF623O75123 536 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 FKBP6O75344 327 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MOCS2O96007 188 aaPredicted RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MT-CO1P00395 513 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MPOP05164 745 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ODC1P11926 461 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ENO3P13929 434 aaPredicted RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 CXCR3P49682 368 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 PLK1P53350 603 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MTTPP55157 894 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 MRPS22P82650 360 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 PCSK7Q16549 785 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 RBM20Q5T481 1227 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 CD300LGQ6UXG3 332 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 LDB1Q86U70 411 aaPredicted RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 SIKE1Q9BRV8 207 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 TRPV6Q9H1D0 765 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
GTF2F1-201ENST00000394456 TSPAN8P19075 237 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 PCSK1P29120 753 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SLC1A2P43004 574 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 NKX3-2P78367 333 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 CEACAM7Q14002 265 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ZYG11AQ6WRX3 759 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 DSELQ8IZU8 1212 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 OR10T2Q8NGX3 314 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SMARCD1Q96GM5 515 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 GPR78Q96P69 363 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 NPAS2Q99743 824 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 TLK1Q9UKI8 766 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 B4GALT3O60512 393 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ALDH1A1P00352 501 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 CSRP3P50461 194 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 RAB27AP51159 221 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ACLYP53396 1101 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 TAS2R39P59534 338 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SEPT6Q14141 434 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ZRSR2Q15696 482 aaKnown RBP13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ANO4Q32M45 955 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 C14orf80Q86SX3 495 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 TXNDC5Q8NBS9 432 aaKnown RBP13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 SLC9A7Q96T83 725 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 IL22Q9GZX6 179 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 CNGB3Q9NQW8 809 aa13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 PAPOLBQ9NRJ5 636 aaKnown RBP13.65□□□□□ -0.22
GTF2F1-201ENST00000394456 PTPRDP23468 1912 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 TARM1B6A8C7 271 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 ATP5BP06576 529 aaKnown RBP13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 CDK7P50613 346 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 RPL14P50914 215 aaKnown RBP13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 CDH17Q12864 832 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 TUSC3Q13454 348 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 IHHQ14623 411 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 CNSTQ6PJW8 725 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 EPAS1Q99814 870 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms