RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PNPOQ9NVS9 261 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 ATP11BQ9Y2G3 1177 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 MYLKQ15746 1914 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 CFAP73A6NFT4 308 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 COCHO43405 550 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 HAUS5O94927 633 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 IRF1P10914 325 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 HMGA1P17096 107 aaKnown RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 ATP5C1P36542 298 aaKnown RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 GLRBP48167 497 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 SERINC3Q13530 473 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 FRG1Q14331 258 aaKnown RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 PTPRCAPQ14761 206 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 NAPRTQ6XQN6 538 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 ANKRD33Q7Z3H0 272 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 CRLF3Q8IUI8 442 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 CEP97Q8IW35 865 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 ARRDC2Q8TBH0 407 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 ISL2Q96A47 359 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 UXTQ9UBK9 157 aaPredicted RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 DNAJC16Q9Y2G8 782 aa15.26■□□□□ 0.03
GPC3-202ENST00000394299 ZFP37Q9Y6Q3 630 aaPredicted RBP15.26■□□□□ 0.03
GPC3-202ENST00000394299 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 ZNF840PA6NDX5 716 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
GPC3-202ENST00000394299 TSPAN3O60637 253 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 IL1BP01584 269 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 CPA3P15088 417 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 DNAJB2P25686 324 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 ITGB8P26012 769 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 SLC1A2P43004 574 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 MSLNQ13421 630 aaPredicted RBP15.25■□□□□ 0.03
GPC3-202ENST00000394299 STXBP5Q5T5C0 1151 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 POTEHQ6S545 545 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 LDB1Q86U70 411 aaPredicted RBP15.25■□□□□ 0.03
GPC3-202ENST00000394299 LRRC49Q8IUZ0 686 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 TTLL2Q9BWV7 592 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 THAP1Q9NVV9 213 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 DNMT3LQ9UJW3 386 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 HBS1LQ9Y450 684 aaKnown RBP15.25■□□□□ 0.03
GPC3-202ENST00000394299 G3V2L1 256 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 FCHO1O14526 889 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 PIRTP0C851 137 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 SPATA31D3P0C874 917 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 DEFB103AP81534 67 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 IKBKEQ14164 716 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 SPATA31D4Q6ZUB0 917 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 CLEC14AQ86T13 490 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 RNF135Q8IUD6 432 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 TTC16Q8NEE8 873 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 NSMCE3Q96MG7 304 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 SORT1Q99523 831 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 GPR22Q99680 433 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 SEMA3CQ99985 751 aa15.25■□□□□ 0.03
GPC3-202ENST00000394299 OR51F1A6NGY5 319 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 F5H5T6 163 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 TIMM44O43615 452 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 ACSL4O60488 711 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 ATP6V1G2O95670 118 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 RALBP11234 206 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 CCR10P46092 362 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 CSE1LP55060 971 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 RING1Q06587 406 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 LBRQ14739 615 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 INSCQ1MX18 579 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 ZNF470Q6ECI4 717 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 CNSTQ6PJW8 725 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 TEX26Q8N6G2 289 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 KCTD4Q8WVF5 259 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SPON2Q9BUD6 331 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 RHOJQ9H4E5 214 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 TK2O00142 265 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 AP3B1O00203 1094 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SKIV2L2P42285 1042 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 CPA2P48052 419 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SERPINH1P50454 418 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 ARSDP51689 593 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SMARCB1Q12824 385 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 PLD1Q13393 1074 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 SIRPB2Q5JXA9 342 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 VWA5B1Q5TIE3 1220 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 RNF168Q8IYW5 571 aaPredicted RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 AGR3Q8TD06 166 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 C2orf15Q8WU43 125 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 NDNQ99608 321 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 TBC1D10AQ9BXI6 508 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 C1QTNF1Q9BXJ1 281 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 NMRAL1Q9HBL8 299 aa15.24■□□□□ 0.03
GPC3-202ENST00000394299 RUVBL2Q9Y230 463 aaKnown RBP15.24■□□□□ 0.03
GPC3-202ENST00000394299 MPOP05164 745 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 SBK3P0C264 359 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 SLC35E2BP0CK96 405 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms