RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MAGEH1Q9H213 219 aa17.8■□□□□ 0.44
SNRPA1-202ENST00000394082 TMEM248Q9NWD8 314 aa17.8■□□□□ 0.44
SNRPA1-202ENST00000394082 DNAJC28Q9NX36 388 aa17.8■□□□□ 0.44
SNRPA1-202ENST00000394082 HECAQ9UBI9 543 aaPredicted RBP17.8■□□□□ 0.44
SNRPA1-202ENST00000394082 LY6G6EA0A0G2JKS1 128 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 TEX51A0A1B0GUA7 166 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 GOLGA8SH3BPF8 625 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 FPGTO14772 594 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 FFAR2O15552 330 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 GSRP00390 522 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 MMEP08473 750 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 PTPN9P43378 593 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 GSCP56915 257 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 ERVPABLB-1P60509 514 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 TLE3Q04726 772 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 SGCGQ13326 291 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 ZNF805Q5CZA5 627 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 KDM7AQ6ZMT4 941 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 PARS2Q7L3T8 475 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 ZNF548Q8NEK5 533 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 CENPIQ92674 756 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 ARHGEF2Q92974 986 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 HIC2Q96JB3 615 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 TBATAQ96M53 351 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 SALL4Q9UJQ4 1053 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 NOCTQ9UK39 431 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 HPCAL4Q9UM19 191 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 U3KQA8 63 aa17.79■□□□□ 0.44
SNRPA1-202ENST00000394082 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 TOR1BO14657 336 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 POP4O95707 220 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 SDC4P31431 198 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 LSSP48449 732 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 DNA2P51530 1060 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 PFN3P60673 137 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 SNRPD1P62314 119 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 CDR2Q01850 454 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 POLD3Q15054 466 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 C2CD6Q53TS8 623 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 NAA35Q5VZE5 725 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 TRIM72Q6ZMU5 477 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 TMC6Q7Z403 805 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 DRC7Q8IY82 874 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 ZNF248Q8NDW4 579 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 BTN2A2Q8WVV5 523 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 CASKIN2Q8WXE0 1202 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 VOPP1Q96AW1 172 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 FCRL3Q96P31 734 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 METTL5Q9NRN9 209 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 FCF1Q9Y324 198 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 SHROOM3Q8TF72 1996 aa17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 TDRD6O60522 2096 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-202ENST00000394082 MGAQ8IWI9 3026 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 ATMQ13315 3056 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 C2CD4BA6NLJ0 364 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 C16orf96A6NNT2 1141 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 AREL1O15033 823 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 RAD51BO15315 384 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 ACVRL1P37023 503 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 ATP11AP98196 1134 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 C19orf57Q0VDD7 668 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 CCDC14Q49A88 953 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 SPACA3Q8IXA5 215 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 EMC1Q8N766 993 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 SLC39A7Q92504 469 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 NTAN1Q96AB6 310 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 ABCG4Q9H172 646 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 ZDHHC6Q9H6R6 413 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 POLR1BQ9H9Y6 1135 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 NEU3Q9UQ49 428 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 PCDHB1Q9Y5F3 818 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 RAI2Q9Y5P3 530 aa17.77■□□□□ 0.44
SNRPA1-202ENST00000394082 EME2A4GXA9 379 aaPredicted RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 IGLON5A6NGN9 336 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 AQP9O43315 295 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 RAMP2O60895 175 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 LRIG2O94898 1065 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 ABL2P42684 1182 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 UCNP55089 124 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 PCBP4P57723 403 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 YPEL5P62699 121 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 PTK2BQ14289 1009 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 MYLK3Q32MK0 819 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 INO80DQ53TQ3 878 aaPredicted RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 CENPTQ96BT3 561 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 TBC1D31Q96DN5 1066 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 TM6SF2Q9BZW4 377 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 GANQ9H2C0 597 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 NDFIP2Q9NV92 336 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 MFHAS1Q9Y4C4 1052 aa17.76■□□□□ 0.43
SNRPA1-202ENST00000394082 HELZ2Q9BYK8 2649 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms